<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23797

Description U-box domain-containing protein 35
SequenceMSRLIQEKKLGAGRVVAVAIENNKTSQYAAKWAVDNLLPKDQALLLLHVRQRVSSIPTPTGNLVSLEGNDDVARAYMQQMDNESKELFASFRVFCNRKSIQCKEILLEDMDISKGLIEGISKYSVELLVLGAASRSGLVRRFRTSDVPSLVSKGAPPFCTVYIIAKGKISSVKTATAPLTAKPPARNNTMQPQQSLQTPERMDTQITRNPIPPRPSSEKPSYIVRQLSSDEDEIISPFTRSGRGNYISYESSIPDSDISFVSSGRPSVDRMFPSMYDDMDSGTNRLSTGSDFDVRSFGSSFSGAKSIDHGDYSFSSQDSGTSMSSSMFSASDEVEAEMRRLKLELKQTMELYSSACKEAMTAKQKALELQRWKVEEQRKLEDARLAEGTALAMAEREKVKCMAAMEAAETSRKIAELEAQKRMSVESAHKKKNADILSHSPARYRKYTIEEIEEATKFFSNSLKIGEGGYGPVYRSELDHTPVAIKVLKPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPEFGCLVYEYMANGSLDDCLFRRGNKPALPWQLRFRIAAEIATGLLFLHQTKPEPLVHRDLKPGNILLDRNYVSKISDVGLARLVPPTVADTVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDIYSLGIMLLQMITAKPPMGLTHHVGRAIEKGTFADMLDPAVEDWPVEHALHFAKLALACAEMRRKDRPDLGKVVLPELNKLRDFAEENMPMMMMFGMSTGFTPRNNYNYSSSTFSSVQDSMSESQSMSGMSGYESRSSSSSPGRM
Length789
PositionTail
OrganismGlycine soja (Wild soybean)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Glycine> Glycine subgen. Soja.
Aromaticity0.07
Grand average of hydropathy-0.391
Instability index51.39
Isoelectric point7.87
Molecular weight87679.16
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP23797
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      88.49|      29|      49|     366|     414|       1
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  355-  383 (49.90/67.68)	ACKEAMTAKQKA.LELQ.RWKVEEQRKLEDA
  404-  434 (38.58/15.53)	AMEAAETSRKIAeLEAQkRMSVESAHKKKNA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      57.46|      18|      21|     222|     241|       2
---------------------------------------------------------------------------
  222-  241 (26.45/21.01)	YIVRQLSSDEDEIisPFTRS
  246-  263 (31.02/18.14)	YISYESSIPDSDI..SFVSS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     114.19|      28|     474|     272|     300|       3
---------------------------------------------------------------------------
  272-  300 (46.73/33.50)	FPSMYDDMdSGTNRLSTGS.DFDVRSFGSS
  302-  322 (20.05/ 7.38)	.........SGAKSIDHGDySFSSQDSGTS
  758-  785 (47.42/29.27)	FSSVQDSM.SESQSMSGMS.GYESRSSSSS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     126.97|      40|     474|     101|     184|       4
---------------------------------------------------------------------------
  118-  167 (60.24/120.04)	EGISKYSVELLVLGAASRSGLVrrfrtsdvpsLVSKGAPPF.CTVY.IIAKG
  494-  535 (66.73/29.97)	QGRSQFQQEVEVLSCIRHPNMV..........LLLGACPEFgCLVYeYMANG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      46.19|      12|      19|     188|     199|       7
---------------------------------------------------------------------------
  188-  199 (22.56/12.89)	NTMQPQQSLQTP
  209-  220 (23.63/13.87)	NPIPPRPSSEKP
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP23797 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) ATAPLTAKPPARNNTMQPQQSLQTPERMDTQITRNPIPPRPSSEKPSYIVRQ
175
226










Molecular Recognition Features






MoRF SequenceStartStop




NANANA