<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23735

Description U-box domain-containing protein 35
SequenceMSRLIQEKKLGAGRVVAVAIENNKTSQYAAKWAVDNLLPKDQALLLVHVRQKASSIPTPTGNLVSLDGNDDVTRAYMQQMDNESKELFASFRVFCNRKSIQCKEILLEDMDISKGLIEGISKYSVELLVLGAASRSGLVRRFRISDIPSAVSKGAPPFCTVYIIAKGKISSVKTATAPLTAKPSTRNNTMQPLQSFQTPERMDTQITRNPIPPRSSTEKPSYIVRQLPSNEDEIISPFTRPGRGNCRYESTIPDSDISFVSSGRPSVDRLFPSMYDDMDSGMNTRLSTGSDFDVRSFGSSFSGAKSIDHGDYSFSSQDSGTSMSSSMFSASEEVEAEVRRLKLELKQTMEMYSSVCKEATTAKQKALELQRWKVEEQRKLEDTRLAEGTALAMAEREKVKCMAAMKSAETSRKIAELEAQKRISVESEHKKKNVDILSHSPVRYRKYTIEEIEEATKFFSNSLKIGEGGYGPVYRSELDHTPVAIKVLKPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPEFGCLVYEYMANGSLDDCLFRRGNKPALPWQLRFRIAAEIATGLLFLHQTKPEPLVHRDLKPGNILLDRNYVSKISDVGLARLVPPKVADTVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDVYSLGIMLLQMITAKPPMGLTHHVGRSIENGTFADMLDPAVEDWPVEHALHFAKLSLACAEMRRKDRPDLGKVVLPELNKLRDFADENMPMMMLFGMPTGFTPRNNYNYSNSSFSSVQDSMSESQSMSGMSGYESHSSSSSVGRM
Length789
PositionTail
OrganismGlycine soja (Wild soybean)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Glycine> Glycine subgen. Soja.
Aromaticity0.07
Grand average of hydropathy-0.395
Instability index47.96
Isoelectric point8.26
Molecular weight87838.35
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP23735
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     151.04|      36|      37|     245|     281|       1
---------------------------------------------------------------------------
  211-  237 (32.70/19.26)	.......IPPRS.....S..TEKPSyIVRQLPSNEDEIISP
  245-  281 (65.88/53.72)	NCRYeSTIPDSDI.SFVS..SGRPS.VDRLFPSMYDDMDSG
  283-  320 (52.47/36.81)	NTRL.STGSDFDVrSFGSsfSGAKS.IDHGDYS.FSSQDSG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      69.90|      24|      48|     356|     379|       3
---------------------------------------------------------------------------
  356-  379 (43.00/34.21)	C....KEATTAKQKA.LELQ.RWKVEEQRK
  401-  430 (26.89/18.52)	CmaamKSAETSRKIAeLEAQkRISVESEHK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      33.53|      10|      19|     149|     158|       7
---------------------------------------------------------------------------
  149-  158 (17.71/ 9.60)	SAVSKGAPPF
  170-  179 (15.83/ 7.86)	SSVKTATAPL
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP23735 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) ATAPLTAKPSTRNNTMQPLQSFQTPERMDTQITRNPIPPRSSTEKPSYIVRQLP
175
228










Molecular Recognition Features






MoRF SequenceStartStop




NANANA