<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23698
Description |
Mediator of RNA polymerase II transcription subunit 33A isoform A |
Sequence | MLGLWGMECVAEMTKVAQQKGSDPLLWAVQMYSNLNSAGESLPSLQLAEFLVSYICWDNNVPILWKFLEKALTLQIVPPMLLLALLSVRVIPCRHVQPAAYRLYLELVKRHAFELKSQINRPDYQKVMKSIDAVLHLSNIFGMPQSEPGILVVEFIFSIVWQLLDASLDDEGLLEFTPDKKSRWATLYHDMELDRHDNYSEQRTEHHEKLQNANTLMAVEMIGQFLQDKISSRLLYLARQNLPAHWLSFTQRLQLLGANSLALRKSRTLSPEALLQLTSDSCMVLSRECKTNSQKKFQTVMSFEYLSSSASLCHGASHSALWIPLDLVLEDSMDGYQVSATSAIETISGLIKTLRAINGTSWHDTFLGLWLATLRLVQRERDPIDGPMPHLETRLCMLLCIIPLVVGDLIEEEEERTPVDEKDNGPTGCWKEKKVAGKCRDDLVSSLQVLGDYQSLLTPPQPVLAAANQAAAKAMLFVSGITIGSAYFDCLNMTEMPVDCSGNMRHLIVEACIARNLLDTSAYLWPGYVNGRINQIPQCMPAQVPGWSSFMKGTPLTSVMVNALVSSPATSLAELEKIFEIAIEGSEDEKISAAAILCGASLICGWNIQEHTVHFILRLLSPPVPAENTEGNNYLINYAPILNVLFVGIASVDCVQIFSLHGLVPQLACSLMPICEVFGSCVPNISWTLTSGEEISAHAVFSNAFILLLKLWRFNRPPLEYGIGDVPTVGSQLTPEYLLLVRNSHLMSAGNIHKDRNRRRLSEIASLSSPNSVFVDSFPKLKVWYRQHQACIASTLSGLVHGTPFHQIVEGLLNMMFRKINRGSQTTITSGSSSSSGPANEDASIGPKLPAWDILEAIPFVVDAALTACAHGRLSPRELATGLKDLADFLPASLATIISYFSAEVTRGVWKPVFMNGTDWPSPAANLLNVEGQIRKILAATGVDVPSLASGDSCPATLPLPLAAFTSLTITYKVDKASERFLNLAGQTLESLAAGCPWPCMPIVASLWTLKAKRWSDFLIFSASRTVFLHNSDAAVQLLKSCFTATLGMNSSPISSSGGVGALLGHGFKYHLCGGLCPVAPGILYLRAYGSIRDVVFLTEEIVSILMHSVREIVCSGLPRDRLEKLKANKDGIKYGQVSLAASMTRVKLAAALGASLVWISGGLMLVQLLIKETLPSWFISVQRLDQEEKSGGMVAMLGGYALAYFAVLCGAFAWGVDSSSSASKRRPKVLGTHMEFLASALDGKISLGCDSATWRAYVSGFVSLMVGCTPNWVLEVDVHVLKRLSNGLRQLNEEELALALLGVGGVGTMDAAAELIIDTEI |
Length | 1322 |
Position | Tail |
Organism | Glycine soja (Wild soybean) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade>
NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Glycine>
Glycine subgen. Soja.
|
Aromaticity | 0.08 |
Grand average of hydropathy | 0.190 |
Instability index | 44.10 |
Isoelectric point | 5.98 |
Molecular weight | 144515.95 |
Publications | |
Function
Annotated function |
|
GO - Cellular Component | integral component of membrane GO:0016021 IEA:UniProtKB-KW
mediator complex GO:0016592 IEA:InterPro
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GO - Biological Function | |
GO - Biological Process | regulation of phenylpropanoid metabolic process GO:2000762 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP23698
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 342.23| 89| 363| 513| 605| 1
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513- 605 (141.33/90.02) IARNLLDTSAYL......................WPGYVNGRINQIPQCMPA.......QVP..GWSS.FMKGTPLTSVMVNALvSSPATSLaeLEKIFeIAIEGSEDEKISAAAILCGASLICG
883- 951 (89.76/46.92) ....LKDLADFL.......................P....ASLATIISYFSA.......EVTrgVWKPvFMNGTDWPSPAANLL.................NVEG.QIRKILAATGVDVPSLASG
955- 1065 (111.14/59.85) PATLPLPLAAFTsltitykvdkaserflnlagqtLESLAAG..CPWP.CMPIvaslwtlKAK..RWSD.FLIFSASRTVFLHN..SDAAVQL..LKSCF.TATLGMNSSPISSSG...GVGALLG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 56.92| 18| 363| 2| 25| 2
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2- 25 (23.56/33.47) LGLWgmecVAEMTKVaqQKGSDPL
367- 384 (33.37/21.65) LGLW....LATLRLV..QRERDPI
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 71.13| 23| 363| 846| 881| 5
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386- 429 (30.99/ 8.39) GP.MPHLEtrlcmLLCIIPLVVgdlieeeeertpvdekDNGPTGC
846- 869 (40.14/41.49) GPkLPAWD.....ILEAIPFVV................DAALTAC
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 75.78| 24| 134| 632| 665| 8
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634- 661 (33.98/40.63) YLINYAPILNVLFVgiaSVDCVQIFsLH
1085- 1108 (41.79/16.93) YLRAYGSIRDVVFL...TEEIVSIL.MH
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 278.69| 89| 461| 269| 361| 9
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269- 361 (138.06/99.32) LSPEALLQLTSDSCMVLSRECKTNSQKKFQTVMSfeyLSSSAS.LCHGASHSALWI.PLDLVLEDSMDGYqVSATSAIETISGLIKTL.RAINGTS
733- 824 (140.63/88.73) LTPEYLLLVRNSHLMSAGNIHKDRNRRRLSEIAS...LSSPNSvFVDSFPKLKVWYrQHQACIASTLSGL.VHGTPFHQIVEGLLNMMfRKINRGS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 52.55| 14| 932| 136| 151| 10
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136- 151 (23.15/20.25) HLSNifGMPQSEPGIL
1071- 1084 (29.40/17.98) HLCG..GLCPVAPGIL
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