<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23671

Description U-box domain-containing protein 35 isoform E
SequenceMWLQKNHWDKKDGVKGIVAVAIDSDKGSQNALKWAIDHLLNKGSNVVLLHVKHKPSSLSASASLTTPRAGANSIAHAEPSALVCHDPDEQTKEIFRPYRVFCARKDIHCKDVVLEDMDVSKALIEYSSQYAIEHLVIGTSNKGGFLRFKIADIPGSVSKGAPDFCTVYIVAKGKIQSMRSASRAAPAFSPLQNQFSHASARSDHSDPRVPLANGAKGPQRRSFEAPPHRSQDAPRKSNDGTTDSFRSPFTRRGMTDKSYGEISVPDSDISFVSSRRSSTDRSFLSLYNNNNNNNSETGMSNPRLSFSSDTDGNNYSFESMHFGRRSMDISSDFSSFSQESEGLSFSASQGMDDVEAEMRRLKLELNQIMEKYSNACKEAFKAQQKAVELQRWKLEEERRLEEARLAEEAALAVAEKEKARSKAAMENAEVQQRIAELESQKRINAEKKAFMESEEKRKAVDALSNNYVRYRKYTIEEIEAATNFFTESQKIGEGGYGPVYKCHLDHTPVAVKVLRPDAAQGRSQFQREVEVLSCIRHPNMVLLLGACPEYGCLVYEHMSNGSLDDRLFCRGNTLPIPWQLRFRIAAEIGTGLLFLHQTKPEPLVHRDLKPANILLDRNYVAKISDVGLARLVPPSVADAVTQYRMTSAAGTFCYIDPEYQQTGMLGVKSDIYSLGIIFLQILTASPPMGLAHHVGRAIEKGTFADMLDPKVSDWPVEDALSLAKIGIRCAELRRRDRPDLGKEVLPELNRLRELAENNDHHHSMFSSYGSPYNQSQVSLQPVRMEPVLHFPILGRAQETHQVMFDIQSKQDLLQ
Length814
PositionTail
OrganismGlycine soja (Wild soybean)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Glycine> Glycine subgen. Soja.
Aromaticity0.07
Grand average of hydropathy-0.511
Instability index50.03
Isoelectric point7.35
Molecular weight91060.87
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP23671
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     104.97|      25|      25|     179|     203|       1
---------------------------------------------------------------------------
  156-  179 (30.39/15.37)	SVSK...GAPDFCTV...YIVAKGKiqSMR
  180-  204 (43.07/24.85)	SASR...AAPAFSPLQNQFSHASAR..SDH
  205-  231 (31.51/16.21)	SDPRvplANGAKGPQRRSFEAPPHR..SQ.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     111.79|      27|      28|     400|     426|       2
---------------------------------------------------------------------------
  363-  397 (35.70/20.47)	LELNQIMEKYSNACKEAFKAQQKAvelqrwklEEE
  400-  426 (39.74/23.53)	LEEARLAEEAALAVAEKEKARSKA........AME
  429-  452 (36.35/20.96)	EVQQRIAE...LESQKRINAEKKA........FME
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     104.29|      34|      94|      10|      45|       3
---------------------------------------------------------------------------
   10-   43 (58.53/41.44)	KKD.GVKGIVAVAIDSDKG.SQNALKWAIDHLL....NKG
  104-  143 (45.77/25.04)	RKDiHCKDVVLEDMDVSKAlIEYSSQYAIEHLVigtsNKG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     139.79|      42|      71|     234|     275|       4
---------------------------------------------------------------------------
  234-  275 (77.45/51.94)	PRKS....NDGTTDSFRS.PFTRRGMTDKS.YGEISVPDSDISFVSSR
  302-  349 (62.34/40.34)	PRLSfssdTDGNNYSFESmHFGRRSMDISSdFSSFSQESEGLSFSASQ
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP23671 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) QNQFSHASARSDHSDPRVPLANGAKGPQRRSFEAPPHRSQDAPRKSNDGTTDSFRSPFTRRGMTDKSYGEI
192
262










Molecular Recognition Features






MoRF SequenceStartStop




1) MHFGRRSMDI
320
329