Description | Mediator of RNA polymerase II transcription subunit 15a isoform C |
Sequence | MGSYGIQIVVSRVVFNSAHCVCTSLDSTAQTGQSSGGDWQEEVYQKIKSMKESYLPELNEMYQKIASKLQQHDSLPQQPKSDQLEKLKVFKMMLERIITFLQVSKSNISPNFKEKLNSYEKQIINFINTNRPRKNMPGHLPSPHMHSMSQSQPQVTQVQSHENQMNSQLQTTNMQGSVATMQQNNMAAMQHNSLSGVSTAQQSKMNSMQPSTNLDSGPGNAVNSLQQVPVSSLQQNPVSAPQLTNVNSLSSQAGVNVVQPNHNPLQPGSSMLQHQQLKQQQEQQMLQNQQLKQQYQRQLIQRKQQQILQQQQQQQQLHQTAKQQLPAQLPTHQIQQLHQMNDANDIKMRQGISVKPGVFQQPLTSSQRSTYPHQQMKGSPFPVSSPQLLQATSPQIPQHSSPQVDQQNHLPSLTKVATPLQSANSPFMVPTPSPPLAPSPMPGDSEKPISGVSSISNAANIGYQLTGGAAAPAQSLAIGTPGISASPLLAEFTGPDGAHGNALAPTSGKLTVTEQPIERLIKAVKSMSPKALSSAVSDIGSVVSMNDRIAGSAPGNGSRAAVGEDLVAMTNCRLQARNFITQDGANGTRRMKRYTNATPLNVVSSPGSMNDSIKQLTAEASDLDSTATSRFKMPRIEANHSLLEEIREVNQRLIDTVVDISNEEVDPTAAAAAAEGTEGTIVKCSYNAVALGPSLKSQYASAQMSPIQPLHLLVPTNYPNCSPILLDKFPVESSKENEDLSVKAKSRFSISLRSLSQPMSLGEIARTWDVCARIVISEHAQQSGGGSFSSKYGTWENCLTT |
Length | 801 |
Position | Tail |
Organism | Glycine soja (Wild soybean) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Glycine> Glycine subgen. Soja. |
Aromaticity | 0.04 |
Grand average of hydropathy | -0.540 |
Instability index | 60.52 |
Isoelectric point | 8.91 |
Molecular weight | 87030.07 |
Publications |
Annotated function |
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GO - Cellular Component | |
GO - Biological Function | chromatin DNA binding GO:0031490 IEA:InterPro transcription coactivator activity GO:0003713 IEA:InterPro |
GO - Biological Process |
Binary Interactions |
Repeats | >MDP23654 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 52.55| 17| 17| 289| 305| 1 --------------------------------------------------------------------------- 289- 305 (29.60/14.11) QQLKQQYQRQLIQRKQQ 335- 351 (22.95/ 8.99) QQLHQMNDANDIKMRQG --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 107.06| 26| 29| 170| 197| 2 --------------------------------------------------------------------------- 135- 158 (37.89/15.16) ...NMPGHLPSPHMHSMSQSQ....PQVT...QV 170- 197 (43.76/24.30) QttNMQGSVATMQQNNMAAMQH...NSLS...GV 229- 255 (25.41/ 7.99) P.......VSSLQQNPVSAPQLtnvNSLSsqaGV --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 4| 119.54| 29| 29| 451| 479| 3 --------------------------------------------------------------------------- 417- 469 (28.40/14.00) ATPLQSanspfmvptpsppLApspmpgdsekpIS..........................GVSSISN....AANIGYQLTGGA 470- 496 (41.88/24.12) AAPAQS.............LA...........IG..........................T.PGIS.....ASPLLAEFTGPD 497- 553 (20.72/ 8.23) GAHGNA.............LA.........ptSGkltvteqpierlikavksmspkalssAVSDIGS....VVSMNDRIAGSA 554- 585 (28.54/14.10) PGNGSR.............AA...........VG.........................eDLVAMTNcrlqARNFITQ..DGA --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 48.44| 13| 29| 275| 287| 4 --------------------------------------------------------------------------- 275- 287 (24.33/10.84) QQLKQQQEQQMLQ 306- 318 (24.12/10.68) QILQQQQQQQQLH --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 82.70| 27| 114| 619| 646| 5 --------------------------------------------------------------------------- 619- 646 (42.03/35.37) EASDLDSTATSRFKMP..RIEANHSLlEEI 736- 764 (40.66/28.71) ENEDLSVKAKSRFSISlrSLSQPMSL.GEI --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 44.84| 12| 30| 391| 402| 8 --------------------------------------------------------------------------- 391- 402 (24.03/10.48) ATSP.QIPQHSSP 423- 435 (20.81/ 8.05) ANSPfMVPTPSPP --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 49.16| 16| 55| 48| 64| 9 --------------------------------------------------------------------------- 41- 57 (24.24/14.51) EEVYQK..iKSMKESYLPE 59- 77 (24.91/10.08) NEMYQKiasKLQQHDSLPQ --------------------------------------------------------------------------- |
IDR Sequence | Start | Stop |
1) IINFINTNRPRKNMPGHLPSPHMHSMSQSQPQVTQVQSHENQMNSQLQTTNMQGSVATMQQNNMAAMQHNSLSGVSTAQQSKMNSMQPSTNLDSGPGNAVNSLQQVPVSSLQQNPVSAPQLTNVNSLSSQAGVNVVQPNHNPLQPGSSMLQHQQLKQQQEQQMLQNQQLKQQY 2) NFITQDGANGTRRMKRYTNATPLNVVSSPGSM 3) RKQQQILQQQQQQQQLHQTAKQQLPAQLPTHQIQQLHQMNDANDIKMRQGISVKPGVFQQPLTSSQRSTYPHQQMKGSPFPVSSPQLLQATSPQIPQHSSPQVDQQNHLPSLTKVATPLQSANSPFMVPTPSPPLAPSPMPGDSEKPISGVS | 123 578 302 | 295 609 453 |
MoRF Sequence | Start | Stop |
NA | NA | NA |
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