<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23627
Description |
Mediator of RNA polymerase II transcription subunit 33A isoform B |
Sequence | MLKASLRCNYRFCQSPCWVPFDIYMENAMDSRQIPTKSAIDVLTEAIKTLQILNQASWQETFLALWLSALRLVQRERDPPEGPIPHLVARLCVLLCIVPLAIANVLRDDSEHNSSSVQVSMESEYRHEMKSGSSMKLGLISSVQVLGHFSGLLCPPTLVIDAANQAARKAASFIYNTMNGKGESGTGIHANTNTKAGGNLRHLIVEACIARNLMDTSVYFWPGYVSTSVLSLSDSSPLEKSPWSIFMEGTPLNNTLINSLTVTPASSLVEIEKLYYIALNGSDVERPAAAKILCGASLSHGWYIQEHVVHHVVKLLASPVPPSHSGSQSPLVNNMPMLCAVLRGTSSIDTIHILSLYGVVPAVAASLLPLCETFGSIKPTSNSTGDESSSTSTSTSTYMTFSLAFLFLIRLWKFCRPPLDLCITELGVAVGGLEYILSLHNNRAMFSQDKLKSNPSLSDSASVKPVYIDSFPKLRALYCQYKSCVASALSGISTGNSIHQTANMILSMIYQKITKGGISSSNSSSPTTASSNACSSLMNSGEDNFQRPLLPAWEVLEALPFVLESILTACVHGRISSRELTTGLRDLVDFLPASLAAIIDYFSSEVTRGVWKLVPMNGTDWPSPAALIQSIESEIKAILTHVGVEVPNRSSGGSPVMLPLPMAALVSLSITFKLDKSQEYMHAITGAALENCASGCPWPSMPVIGSLWAQKVRRWHNFIVVSGSRSVFRHSNECVAQLLRSCFTSFLGTLCVSTSKLTAECNVNGLLGSTITAPGPYPFVAPGFLFLRSCRNIHNVQYVNDIIVGLVTEYSNELAGRRMGASSRHIKSNEVSLSLSAQSAKEVATLGASLLCAAGGILLVQELYKETIPTWLLSSRDVKQNNDSVGSYILEGYAMAYLLILSGSIIWGVGTKLPSGTFNRRKRTIEVHLDFLAEVMEKKISLSCNPITWKTYVCCLVGLMVSLAPAWVQEVKVDTLRKLARGLSRWNEHELALSLLHRGGTAAMGALAELVNVIESEHMLPCS |
Length | 1023 |
Position | Tail |
Organism | Glycine soja (Wild soybean) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade>
NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Glycine>
Glycine subgen. Soja.
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Aromaticity | 0.07 |
Grand average of hydropathy | 0.170 |
Instability index | 47.79 |
Isoelectric point | 7.88 |
Molecular weight | 110984.98 |
Publications | |
Function
Annotated function |
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GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
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GO - Biological Function | |
GO - Biological Process | regulation of phenylpropanoid metabolic process GO:2000762 IEA:InterPro
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Interaction
Repeat regions
Repeats |
>MDP23627
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 112.53| 33| 76| 11| 45| 1
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11- 45 (56.61/44.07) RFCQSPCWVPFDIymENAMDSRQIPTKSAIDVLTE
90- 122 (55.92/36.04) RLCVLLCIVPLAI..ANVLRDDSEHNSSSVQVSME
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 276.23| 75| 77| 693| 769| 2
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693- 761 (105.18/65.42) ...........ASGcPWPSM.PVIGSLWAQKVRRWHN..FI..VVSGSRSVFRHSNECVAQ.LLRSCFTSFLGTLCVSTSkLTAEC
762- 839 (97.41/52.40) NVNGLLGStitAPG.PYPFVaP..GFLFLRSCRNIHNvqYVndIIVG..LVTEYSNELAGR.RMGAS.SRHIKSNEVSLS.LSAQS
842- 904 (73.64/37.65) EVATLGASllcAAG....GI.LLVQELYKETIPTW........LLS.SRDV.KQNNDSVGSyILEGYAMAYLLILSGS........
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 526.51| 175| 323| 134| 341| 3
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134- 341 (263.73/241.92) SMKLGLISSvqvLGHFSGLLCP.PTLVIDA.........ANQAARKAASFIYNTMNGKGESGTgiHANTNTKAGGNlrhliveACiaRNLMDT..SVYFWPGYVSTSVLslsDSSP.LEKSPWSIFMEG....TPLNNTLINSLTVTPA.........SSLVE..IEKLyyIALNGSDVERPAAakilcgaslshgwYIQ..EHVVHHVVKLLASPVPPSHSGSqSPLVNNMPMLCAV
462- 666 (262.77/168.73) SVKPVYIDS...FPKLRALYCQyKSCVASAlsgistgnsIHQTANMILSMIYQKITKGGISSS..NSSSPTTASSN.......AC..SSLMNSgeDNFQRPLLPAWEVL...EALPfVLESILTACVHGrissRELTTGLRDLVDFLPAslaaiidyfSSEVTrgVWKL..VPMNGTDWPSPAA.............LIQsiESEIKAILTHVGVEVPNRSSGG.SPVMLPLPMAALV
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