<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23626
Description |
Mediator of RNA polymerase II transcription subunit 33A isoform A |
Sequence | MELALALEWDDQVREGVLKKLKLWQQRNNKPPTAWVTELVEHFNTLGIALPCPELGELLVSQICFDNNHPLIWKFIHHALSSRLLFPLQILSLLSSNVLRHRHSHPHAFALFLPLLAQHAFSFLPTLSNNLKMVNSVDAVMRFSETYKIRDLELGHVFVLFFYDIVVALIDCVLIDWGFQVTFSEKSRLVTGGGGGDDEEDYMEIDRNMTTMTQSFEKSEQIRKRNSFTALEVLERLTESRKATILLQSVLLNMPEKFNCLQQRLQFLESLELASSELKSVNQVLTKVSASIRGVSRFDYCLRKHQLVGMLKASLRCNYRFCQSPCWVPFDIYMENAMDSRQIPTKSAIDVLTEAIKTLQILNQASWQETFLALWLSALRLVQRERDPPEGPIPHLVARLCVLLCIVPLAIANVLRDDSEHNSSSVQVSMESEYRHEMKSGSSMKLGLISSVQVLGHFSGLLCPPTLVIDAANQAARKAASFIYNTMNGKGESGTGIHANTNTKAGGNLRHLIVEACIARNLMDTSVYFWPGYVSTSVLSLSDSSPLEKSPWSIFMEGTPLNNTLINSLTVTPASSLVEIEKLYYIALNGSDVERPAAAKILCGASLSHGWYIQEHVVHHVVKLLASPVPPSHSGSQSPLVNNMPMLCAVLRGTSSIDTIHILSLYGVVPAVAASLLPLCETFGSIKPTSNSTGDESSSTSTSTSTYMTFSLAFLFLIRLWKFCRPPLDLCITELGVAVGGLEYILSLHNNRAMFSQDKLKSNPSLSDSASVKPVYIDSFPKLRALYCQYKSCVASALSGISTGNSIHQTANMILSMIYQKITKGGISSSNSSSPTTASSNACSSLMNSGEDNFQRPLLPAWEVLEALPFVLESILTACVHGRISSRELTTGLRDLVDFLPASLAAIIDYFSSEVTRGVWKLVPMNGTDWPSPAALIQSIESEIKAILTHVGVEVPNRSSGGSPVMLPLPMAALVSLSITFKLDKSQEYMHAITGAALENCASGCPWPSMPVIGSLWAQKVRRWHNFIVVSGSRSVFRHSNECVAQLLRSCFTSFLGTLCVSTSKLTAECNVNGLLGSTITAPGPYPFVAPGFLFLRSCRNIHNVQYVNDIIVGLVTEYSNELAGRRMGASSRHIKSNEVSLSLSAQSAKEVATLGASLLCAAGGILLVQELYKETIPTWLLSSRDVKQNNDSVGSYILEGYAMAYLLILSGSIIWGVGTKLPSGTFNRRKRTIEVHLDFLAEVMEKKISLSCNPITWKTYVCCLVGLMVSLAPAWVQEVKVDTLRKLARGLSRWNEHELALSLLHRGGTAAMGALAELVNVIESEHMLPCS |
Length | 1332 |
Position | Tail |
Organism | Glycine soja (Wild soybean) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade>
NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Glycine>
Glycine subgen. Soja.
|
Aromaticity | 0.08 |
Grand average of hydropathy | 0.128 |
Instability index | 46.80 |
Isoelectric point | 7.35 |
Molecular weight | 146464.67 |
Publications | |
Function
Annotated function |
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GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
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GO - Biological Function | |
GO - Biological Process | regulation of phenylpropanoid metabolic process GO:2000762 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP23626
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 276.23| 75| 77| 1002| 1078| 2
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1002- 1070 (105.18/68.25) ...........ASGcPWPSM.PVIGSLWAQKVRRWHN..FI..VVSGSRSVFRHSNECVAQ.LLRSCFTSFLGTLCVSTSkLTAEC
1071- 1148 (97.41/54.65) NVNGLLGStitAPG.PYPFVaP..GFLFLRSCRNIHNvqYVndIIVG..LVTEYSNELAGR.RMGAS.SRHIKSNEVSLS.LSAQS
1151- 1213 (73.64/39.25) EVATLGASllcAAG....GI.LLVQELYKETIPTW........LLS.SRDV.KQNNDSVGSyILEGYAMAYLLILSGS........
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 55.39| 16| 21| 283| 298| 4
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283- 298 (26.18/15.40) QVLTKVSASIRGVSRF
306- 321 (29.21/17.99) QLVGMLKASLRCNYRF
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 58.74| 18| 149| 118| 135| 5
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118- 135 (33.37/18.83) QHAFSFLPTL...SNNLKMVN
262- 282 (25.37/12.65) QQRLQFLESLelaSSELKSVN
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 41.05| 11| 23| 800| 810| 10
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800- 810 (20.97/12.20) GISTGNSIHQT
826- 836 (20.09/11.36) GISSSNSSSPT
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 145.96| 42| 371| 9| 51| 11
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9- 51 (69.73/58.34) WDDQVREGVLKKLKLwQQRNNKPPTAWVTELVEHFNTLGIALP
367- 408 (76.23/56.91) WQETFLALWLSALRL.VQRERDPPEGPIPHLVARLCVLLCIVP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 53.44| 17| 23| 876| 892| 12
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876- 892 (30.28/20.34) LTACVHGRIS..SRELTTG
900- 918 (23.16/13.67) LPASLAAIIDyfSSEVTRG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 64.15| 17| 325| 629| 646| 14
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629- 646 (30.24/19.99) VPPSHSGSqSPLVNNMPM
955- 971 (33.91/18.08) VPNRSSGG.SPVMLPLPM
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