<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23594

Description Uncharacterized protein
SequenceMEVQVQGQAGQVQGQGQGQGQGQGQGQGERLNQAVQQQLNLEQVKTRAISLFKAISRILEDFDAYARTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFLVYPKNVNAENATILPVMLSSKLLPEMETEDSSKRDQLLQGMQNLPIPTQIEKLKARIDMIAAACEGAEKVLADTRKAYCFGTRQGPTITPTLDKGQAAKIQEQENLLRAAVNTGLRIPPDQRQITPALPMHLAEAFTPNEGAQSFPDASNNSMYMKNTPLSSNSMGGQNPMVQASGSQLLGRSAASPSAATSATSFDNTTASPLPYANSPRSSASMMNAPSPQQQTQQQQQQQQSPVQAQQRQKLMQLPQQQQQQLLAQQQQFRQSAMQGLGQLHGQHQMQFSQSLGHQQFQGRQLASGHVQHGIGQSQLTQGNQITRLGQFSGAANSALFSAAQTTPNTQMIPNISATMSSRMQFGLPGNNPQRSHATQMLGDQMFNLGSGNPGGMMSIQQQQQLGSQGAFGGMASNAQNLQSNMVTLQNSQQNHPNFNQQRQQNPQQ
Length542
PositionHead
OrganismArachis hypogaea (Peanut)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> dalbergioids sensu lato> Dalbergieae> Pterocarpus clade> Arachis.
Aromaticity0.04
Grand average of hydropathy-0.686
Instability index51.56
Isoelectric point9.39
Molecular weight59036.41
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP23594
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     109.88|      16|      18|     354|     369|       2
---------------------------------------------------------------------------
  333-  347 (26.81/ 6.86)	QQQQQSPVQAQ.Q.RQK
  354-  369 (31.89/ 9.68)	QQQQQLLAQQQ.QFRQS
  372-  388 (25.61/ 6.20)	QGLGQLHGQHQmQFSQS
  523-  538 (25.58/ 6.19)	QNSQQNHPNFN.QQRQQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     182.81|      56|     156|     261|     317|       3
---------------------------------------------------------------------------
  232-  262 (33.90/12.21)	.............PMHLA...........EAFTP....................NEGAQ....SFPDASN..NSMymknTP
  263-  323 (92.14/48.89)	LSSNSM..G.GQNPMVQAsGSQL..LGR.SAASPSAATSAT..........SFDNTTAS....PLPYANSPRSSAsmmnAP
  399-  472 (56.77/25.26)	LASGHVqhGiGQSQLTQ..GNQItrLGQfSGAANSALFSAAqttpntqmipNISATMSSrmqfGLPGNNPQRSHA....T.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     121.60|      38|      44|     142|     179|       5
---------------------------------------------------------------------------
  142-  179 (62.62/29.28)	QGMQNLPI..PTQIEKLKARIDMIAAACEGAEKVLADTRK
  187-  226 (58.99/27.27)	QGPTITPTldKGQAAKIQEQENLLRAAVNTGLRIPPDQRQ
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP23594 with Med8 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) NSALFSAAQTTPNTQMIPNISATMSSRMQFGLPGNNPQRSHATQMLGDQMFNLGSGNPGGMMSIQQQQQLGSQGAFGGMASNAQNLQSNMVTLQNSQQNHPNFNQQRQQNPQQ
2) RAAVNTGLRIPPDQRQITPALPMHLAEAFTPNEGAQSFPDASNNSMYMKNTPLSSNSMGGQNPMVQASGSQLLGRSAASPSAATSATSFDNTTASPLPYANSPRSSASMMNAPSPQQQTQQQQQQQQSPVQAQQRQKLMQLPQQQQQQLLAQQQQFRQSAMQGLGQLHGQHQMQFSQSLGHQQFQGRQLASGHVQHGIGQSQLTQGNQITRL
430
211
542
422










Molecular Recognition Features






MoRF SequenceStartStop




NANANA