<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23589

Description Uncharacterized protein
SequenceMPSDAKDYTVKMANNSQPPSMQFRPVIQAQQGQPFAPMASQQFGLAGHAIPSSNVAMPVGQSPQLQYSQPMQQLPPRHIQPGQPAPSSQAPDIRPTHIHSQLHMPSLAVSAATSHSSYTFQPPYSQQQDNVNAMAQYQPSGQMHAPPAGQPWVSSVSQSAATVTPVQQAGVQSSGTPSTDSATSAPNQQSASDWQEHTAADDRRYYYNKRTRQSSWEKPLELMSPIERADASTVWKEFTSSDGRKYYYNKVTQQSTWSIPEELKLETSDTSNTAVSSAAPSTVTNTASSNTPLTSNGLSSSPASVTPIASSTGPQQLVSGLSSGGTELSTVVTASTTVAGPANPLDTTTPSSVENQASQDFAASTGGASVQDIEETKKGVPVAGKVNVTLPEEKANDKETFAYANKMEAKIAFKALLESANVQSDWTWEQAMREIINDKRYNALKTLGERKQAFNEYLGQRKKLEAEERRMKQKKAREEFTKMLEECKELTSSMRLSKAINMFENDERFNAVDKIRDREDLFESYMVELERKEKENAAEEHRRNLAEYRKFLESCDYVKVHSPWRKVQDRLEDDDRYLRLEKIDRLLVFQDYIRELEKEEEEQKRVQKERVRRGERKNRDAFRKLLEEHVAAGILNAKTQWREYCLKVRDLPQYQAVASNTSGSTPKDLFEDVVEDLENQYHEDKTLVKDIIKSGKITVVSTSVFEEFKAAILEEGSCETISEINLKLIFEDLLERAKEKEEKEAKKRQRLADDLTNLLYTFKDITTSSTWEDCKPLVEETQEYRSMGDENYSREVFEEYITYLKEKAKEKERKREEEKARKEKEREEKEKRKEKEKEKKEKDREREKEKSKDRHKKDDTDSENQDIESHGFKEEKKKDKDKERKHRKRRHSSVEDVDSERDEKEESKKSRKHGSDRKKYLESMQTLQNQTMKPGIEDTRGSTVMVPGKPGAMKNLKTGNSVMMQRFRR
Length969
PositionUnknown
OrganismArachis hypogaea (Peanut)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> dalbergioids sensu lato> Dalbergieae> Pterocarpus clade> Arachis.
Aromaticity0.06
Grand average of hydropathy-1.088
Instability index53.50
Isoelectric point6.48
Molecular weight110679.95
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process
mRNA cis splicing, via spliceosome	GO:0045292	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP23589
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     101.23|      18|      18|     816|     833|       1
---------------------------------------------------------------------------
  519-  536 (20.96/ 7.11)	EDLFESYMVELERKEKEN
  809-  826 (27.85/11.84)	KEKERKREEEKARKEKER
  827-  844 (30.04/13.35)	EEKEKRKEKEKEKKEKDR
  885-  901 (22.38/ 8.09)	KHR.KRRHSSVEDVDSER
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     132.68|      22|      53|      16|      37|       2
---------------------------------------------------------------------------
   16-   34 (34.89/15.64)	........S.....Q.........PPSMQFRPV.IQAQ.QGQP
   35-   67 (23.98/ 8.72)	FAP...maS.....QqfglaghaiPSSNVAMPV.GQSP.QLQY
   68-   84 (32.60/14.19)	SQP........................MQQLPP.RHIQ.PGQP
   85-  105 (20.72/ 6.66)	.AP....sS.....Q.........APDI..RPThIHSQ.LHMP
  107-  139 (20.49/ 6.51)	LAVsaatsHssytfQ.........PPYSQQQDN.VNAMaQYQP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     141.12|      40|      40|     191|     230|       3
---------------------------------------------------------------------------
  177-  217 (69.94/40.40)	PSTDSAtSAPNQQSASD.WQEHTAADDRRYYYNKRTRQSSWE
  218-  258 (71.18/41.25)	KPLELM.SPIERADASTvWKEFTSSDGRKYYYNKVTQQSTWS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             6|     225.34|      40|      40|     412|     451|       4
---------------------------------------------------------------------------
  361-  394 (38.04/21.61)	.FAAST.G...GAS.VQ.D...IEETKKGVPVAGKVNV....TL..............................PEEK
  412-  451 (66.20/43.54)	AFKALL.E...SAN.VQSDWT.WEQAMREIINDKRYNAL..KTL..............................GERK
  453-  488 (39.74/22.93)	AFNEYLgQ...RKK.LEAE....ERRMKQ..KKAREEFT..KML..............................EECK
  490-  518 (24.01/10.69)	...............LTSSMR.LSKAINMFENDERFNAV..DKI..............................RDR.
  551-  617 (26.27/12.45)	....FL.E...SCDyVKVHSP.WRKVQDRLEDDDRYLRL..EKIdrllvfqdyirelekeeeeqkrvqkervrrGERK
  621-  663 (31.09/16.20)	AFRKLL.EehvAAG.ILNAKTqWREYCLKVRDLPQYQAVasNTS..............................G...
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     123.51|      29|      29|     271|     299|       5
---------------------------------------------------------------------------
  271-  292 (32.16/15.76)	........SNTAVSSAAPSTVTNTASSNTP
  293-  314 (39.69/21.03)	LTSNGLS......SS..PASVTPIASSTGP
  317-  335 (19.82/ 7.12)	LVS.GLSsGGTEL.....STVV.TAS....
  336-  360 (31.83/15.53)	.TTVAGP.AN.PLDTTTPSSVENQASQD..
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     127.34|      34|      91|     670|     708|       7
---------------------------------------------------------------------------
  670-  708 (47.46/42.51)	FEDVVE..................DLENQYHEdktlVKDIiKSGKITVVSTSVFEEF
  730-  774 (36.97/20.78)	FEDLLErakekeekeakkrqrladDLTNLLYT....FKDI........TTSSTWEDC
  775-  800 (42.91/25.25)	KP.LVE..................E.TQEY...........RSMGDENYSREVFEEY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      40.39|      13|      15|     933|     945|       8
---------------------------------------------------------------------------
  933-  945 (24.39/16.40)	KPG.IEDTR.GSTVM
  949-  963 (16.00/ 8.19)	KPGaMKNLKtGNSVM
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP23589 with Med35 domain of Kingdom Viridiplantae
Unable to open file!