<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23573

Description Uncharacterized protein
SequenceMKNGCIDFVDFVEKLVSRLTEGDHPVLKTNHVTWLLAQIIRMELVTSTLNPDAKKIDTTRKILSVHRDERNSDPNGPQSTLLEFISSCQCLRIWSLNTTTREYVNNEQLQKGKQIDEWWKQVSKGDRMLDYMNMDDRSIGMFWVLSYTMAQPTCETVMNWLTSAGISELPPQTMGQTERLVATREVTPLPMSLLSGLSLNLCGKLSMLMEEALFVGQVIPSIAIVETYTRLLLVSPHSLFRSHFNHLVQKNSSLLSKSGVTLLLLEILNYRLLPLYRYHGKNKVLMFDVTKIMSALRGKRGDHRIFRLAENLCLNLIFSLRDFFFVRREGKGPSEFTETLNRAAVVTLAILIKTRGVADADHLHYLQSMLEQTLATSHHTWSEKTLRFFPPALREALSGRMDNRSQEIKSWQQTESTVLIQCTQLLSPSADPSYVMTYINHSFPQHRRYLCAGALTLMHGQAENINTGNLGRVLKEFSPEEVTANIYTMVDVLLHHMQVELQQGHSLQDLLSKACATIAFFVWTHELLPLDILLLALIDRDDDPHALRVVISLLDRQELQQRVKLFCITHGPHEHWLYTGVYKRVEVQKALGNHLSGKDRFPVFFDDIAARLLPVIPFIIYRLIENDAMDPADRILCMYSTLLAYHPFRFTFVRDILAYFYGHLPPKLIVRILNVLDISKIPFSESFPQQLTSPNPAVCPPLDYFATLLLGLVNNVIPPLHNNSKSGSMVDATKHNKPPAMSQSGPANSSEGQKAFHQIQDPGTYTQLVLETAVLEILSLPVSASQIVQSLVQIIVNIQPTLIQSNGGLQSGSTGQGSVLPTSPSGGSSDSLGASRSTPSNSGINTSNFASRSGYTCQQLSCLLIQACGLLLAQLPSDFHFQLYLETTRVIKENWWLTDWKRSLGEIDSAVGYALLDPTWAAQDNTSTAIGNIVALLHSFFSNLPQEWLEGAHVIIKQLQPIKSVAMLRIAFRIIGPLLPKLANAHSLFIKTLSLLLSILVDVFGKNSQPPAAVEASEVADLIDFLHHAVHYEGQGGPVQASSKPRPDVLALIGRASENLRPDIQHLLSHLKPDVNSSVYAASHPKLVQNPT
Length1092
PositionTail
OrganismArachis hypogaea (Peanut)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> dalbergioids sensu lato> Dalbergieae> Pterocarpus clade> Arachis.
Aromaticity0.08
Grand average of hydropathy-0.032
Instability index41.42
Isoelectric point6.99
Molecular weight122138.41
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP23573
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      55.05|      18|      33|     934|     953|       1
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  934-  953 (28.52/24.20)	VALLHSFFSN....LPQewLEGAH
  965-  986 (26.53/14.37)	VAMLRIAFRIigplLPK..LANAH
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     726.34|     232|     264|     134|     397|       2
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  134-  345 (261.43/238.87)	..............................................................MDDRS..............IGMFWVLSYTmAQ.............PTCETVMNWLTSAGISELPPQTMGQTERLVATREVTPLPM.......SLLSGLSLNL.CGKLSMLMEEALFVGQ.VIPSIAIVETYT..RLLLvsPHSLFRSHFNHLVQknsSLLSKSGVTLLLLeILNYRLLPLyryhgknkvlmfDVtkIMSALRGKRGDHRIFRLAENLCLNLIFSLR.DFFFVRregKGPSE...FTETLNRAAV
  346-  587 (319.82/238.31)	VTLAILIKTRGVADADHLHYLQSmleqTLATSH...HTWSEKTLRFF....PPALrealsgrMDNRSqeikswqqtestvlIQCTQLLSPS.AD.............PS..YVMTYINHSFPQH..............RRYLCAGAL.......TLMHGQAENInTGNLGRVLKE..FS.....PEEVTANIYTmvDVLL..HHMQVELQQGHSLQ...DLLSKACATIAFF.VWTHELLPL............DI..LLLALIDRDDDPHALRVVISLLDRQELQQRvKLFCIT...HGPHEhwlYTGVYKRVEV
  618-  770 (145.08/89.57)	FIIYRLIENDAMDPADRILCMYS....TLLAYHpfrFTFVRDILAYFyghlPPKL.......................................ivrilnvldiskiPFSESFPQQLTSPNPAVCPPLDYFATLLLGLVNNVIP.PLhnnsksgSMVDATKHNK.PPAMSQSGPANSSEGQkAFHQIQDPGTYT..QLVL....................................................................................................................
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      43.77|      14|      15|     823|     837|       3
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  823-  837 (20.49/15.28)	SPSGGSSDSLgASRS
  840-  853 (23.28/11.94)	SNSGINTSNF.ASRS
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      94.56|      30|      37|    1010|    1046|       4
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 1015- 1046 (49.73/45.55)	EASEvaDL.IDFLHHAVHYEGQ.GGPVQASSKPR
 1055- 1086 (44.83/22.96)	RASE..NLrPDIQHLLSHLKPDvNSSVYAASHPK
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     107.76|      32|     774|      88|     119|       5
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   88-  119 (62.31/38.28)	CQ...CLRIWS....LNTTTREYVNNEQLQKGKQIDE.WW
  857-  896 (45.45/26.08)	CQqlsCLLIQAcgllLAQLPSDFHFQLYLETTRVIKEnWW
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP23573 with Med23 domain of Kingdom Viridiplantae
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