<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23559

Description Uncharacterized protein
SequenceMTINQNQKRLIIVVDGNAMLVQYWPTIISEYLEKIVRNFCDNSQEQENNTVHEVGLVIYTANKSKNTHGSDHIKFLDWTKDMETFLGTLPFFELTGDGSDKLLMTQGLIEAIMMFIRDPKHNDQKKHCVLVALCEPNPTKTLITLPVIEDGQFLGSIETINGDIFDVMQIFAMLNISFSVITPTVHPIFRAIFNKMVHAMLIITITVKANNVDEREIYVLGGRSGEISVLLSRNFIEAHSILQGSTSKNITNFIVQEPITVAAITHVTPDANSVSTTDLPVSEWQSSIAIATMLTGEQSLNAVSADHNESQVDVPNNATPTPVTQIEGHEEDYFSSSFFIDDMIDELIKNNNDDDEGIDGILSPTNDIPNSSVPLAVFSFEDLLNPNEETISCSSSKTKVSGKDFEEVDEHEFGQALRSTTTTNDEQHKNKSKDKAIMTDDSLTQVAASSMDVPSINIAPSPMMMSVGSSSRMGVPNPVLNSAISSSSNPAHHVLESSAVQAEVHDTSGGMLIPGIEAMFGINKNHSFTEPLVNTHHHNQYLSSSSSSPYYSLFPSSSSLGSSRTMHQLEQYPSSSSAIAPPITHMGHTSLLQFQDPYPSSSSAAALNPDYHFLGAANNNNNARIMGGNYSSPSMLFPFEPSPSLASENGGEGPHSIGYFTQLLRKQQQQATQAYYNNQHRRHMHAGPTTYHLPYSSSKDFNQYVIFTWEKISGSIFFY
Length719
PositionUnknown
OrganismArachis hypogaea (Peanut)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> dalbergioids sensu lato> Dalbergieae> Pterocarpus clade> Arachis.
Aromaticity0.08
Grand average of hydropathy-0.291
Instability index48.49
Isoelectric point5.00
Molecular weight79208.59
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP23559
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      86.20|      25|      56|     313|     337|       1
---------------------------------------------------------------------------
  313-  337 (46.11/27.83)	DVPNNATPTPVTQIE...GHEEDYFSSS
  367-  394 (40.10/23.24)	DIPNSSVPLAVFSFEdllNPNEETISCS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     154.33|      22|      25|     560|     581|       2
---------------------------------------------------------------------------
  467-  485 (23.94/ 8.41)	VGSSSRMG..VPNPVLNS.....AIS...
  532-  555 (25.93/ 9.66)	LVNT...HHHNQYLSSSSsspyySLF..P
  560-  581 (40.92/19.03)	LGSSRTMHQLEQYPSSSS.....AIA..P
  586-  609 (32.26/13.62)	MGHTSLLQFQDPYPSSSS.....AAAlnP
  620-  638 (31.28/13.00)	NNNARIMGG..NY.SSPS.....MLF..P
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      67.43|      20|      26|     160|     185|       3
---------------------------------------------------------------------------
  160-  180 (31.87/34.68)	INGDIFDVMqIFAMLNISFSV
  188-  207 (35.56/18.94)	IFRAIFNKM.VHAMLIITITV
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP23559 with Med25 domain of Kingdom Viridiplantae
Unable to open file!