<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23557

Description Uncharacterized protein
SequenceMVRISFYAHVLPLICRYHGKSGEILATALYGHCEGGGYTFSRQATRADASTVWKEFTSSDGRKYYYNKVTQQSTWSIPEELKLARELALKAANQGMQLETSDTSNTAVSSAAPSTVTNTASSNTPLTSNGLASSPASVTPIASSTGPQQLVSGLSSTTGTELSTVVTASTAVAGPANPLDTTTPSSVENQASQDFAAPTGGASVKDIEETKKGLPVAGKVNVTLPEEKANDKETFAYANKMEAKIAFKALLESANVQSDWTWEQAMREIINDKRYNALKTLGERKQAFNEYLGQRKKLEAEERRMKQKKAREEFTKMLEECKELTSSMRWSKAINMFENDERFNAVDKMRDREDLFESYMVELERKEKENAAEEHRRNLAEYRKFLESCDYVKVHSPWRKVQDRLEDDDRYLRLEKIDRLLVFQDYIRELEKEEEEQKRVQKERVRRGERKNRDAFRKLLEEHVAAGILNAKTQWREYCLKVRDLPQYQAVASNTSGSTPKDLFEDVVEDLENQYHEDKTLVKDIIKSGKITVVSTSVFEEFKAAILEEASCETISEINLKLIFEDLLERAKEKEEKEAKKRQRLADDLTNLLYTFKDITTSSTWEDCKPLVEETQEYRSMGDENYSREVFEEYITYLKEKAKEKERKREEEKARKEKEREEKEKRKEKEKEKKEKDREREKEKSKDRHKKDDTDSENQDIESHGFKEEKKKDKDKERKHRKRRHSSVEDVDSERDEKEESKKSRKHGSDRKKSRKHANSPESDNETRHRRHKREHRDGSRKTGGHEELEDGELGDDAEI
Length800
PositionUnknown
OrganismArachis hypogaea (Peanut)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> dalbergioids sensu lato> Dalbergieae> Pterocarpus clade> Arachis.
Aromaticity0.07
Grand average of hydropathy-1.175
Instability index44.29
Isoelectric point6.24
Molecular weight92621.98
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process
mRNA cis splicing, via spliceosome	GO:0045292	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP23557
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     205.41|      35|      35|     646|     680|       1
---------------------------------------------------------------------------
  347-  377 (46.95/15.90)	DKMR.DREDLFESYMV.ELERKEKENAA.E......EHR...R
  646-  676 (42.74/13.86)	.....ERKREEEKARK.EKEREEKEKRK.E....KEKEKKE.K
  677-  714 (39.34/12.23)	DRER...EKEKSKDRH.KKDDTDSENQDiEshgfKEEKKKD.K
  715-  745 (37.27/11.23)	DKERkHRKRRHSSVEDvDSERD.......E....KEESKKS.R
  746-  777 (39.11/12.12)	KHGS.DRK....KSRK.HANSPESDNET.R....HRRHKREhR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     100.16|      21|      22|     113|     133|       2
---------------------------------------------------------------------------
  105-  128 (30.70/15.52)	NTA.VS..saaPSTVTNTASSNTP..LTS
  129-  152 (26.05/12.31)	NGL.AS....sPASVTPIASSTGPqqLVS
  153-  176 (17.84/ 6.65)	.GL.SSttgteLSTVV.TASTAVA..GPA
  177-  199 (25.57/11.98)	NPLdTT....tPSSVENQASQDFA..APT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     282.65|      64|      65|     214|     277|       3
---------------------------------------------------------------------------
  205-  265 (94.81/45.51)	.KDIEETKK..G........................................LPVA.GKVNVTLPEEKANDK.ETFAYANKMEAKIA...F.KALLE...SA...NVQSDWTWEQA
  266-  333 (88.20/41.88)	MREIINDKRYNA........................................LKTL.GERKQAFNEYLGQRK.KLEAEERRMKQKKAreeFtKMLEE...CK...ELTSSMRWSKA
  334-  431 (66.39/29.90)	INMFENDERFNAvdkmrdredlfesymvelerkekenaaeehrrnlaeyrkfLESC.DYVKVHSPWRKVQDRlEDDDRYLRLE.KI......DRLL..........VFQDYIRELE
  432-  475 (33.25/11.70)	.KEEEEQKR...............................................vQKERVRRGERKNRD...............A...F.RKLLEehvAAgilNAKTQW.....
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     146.60|      41|      89|     504|     550|       5
---------------------------------------------------------------------------
  504-  550 (62.90/51.23)	FEDVVE..................DLENQYHEDKTLVKDIIKSgkitvvSTSVFEEFKAAILEEA
  564-  615 (48.19/28.24)	FEDLLErakekeekeakkrqrladDLTNLLYT....FKDITTS........STWEDCKP.LVEET
  617-  642 (35.51/18.91)	..........................EYRSMGDENY.............SREVFEEYITYLKEKA
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP23557 with Med35 domain of Kingdom Viridiplantae
Unable to open file!