<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23529

Description Uncharacterized protein
SequenceMDANNWRPNQGNEPTMDAIDWRSQLSTESRQRIVNKIMETLKKHLPVPGGPLVEVQNIAQRFEEKIYTAATSQTDYLRKISTKMLTIETKSQNTIAANNMPSNQAGPSNSPSDQGLVMQQHSINLPNQPQQRQQILSQNIQSSNVSSQTNLPPVSSLAQTSSQNIGQNSNIQNMTGQNTVGSTIGQNSNVLDMFSGSQRQMTGRQQVVPQQQQQQPQNAQQYLYQQQFMKPKFQLQSQMHPQQQQNLLQPNQIQPSLMQSSPLSSLPQNQQSHNVQQSSQSMIQQTSQVMRHQQQQNSIIHQQQTPLTQPLMMPLQQQQQLHQLMGSQSNVTNMQHPQMLGPQNNVGDIQQQQRLLSQQNNLTNLQQLQQQQPLLNQQSNLANMNQQQLGNTVPGLRQQRLIGPESGNPGMQTRQHSAHMLQQTKVPLQQHSQQNGLLPSQAQQPRPQAAQQQLMPQINSQPSQSHLQLGSQQQPDPLQRDMQQGLQPSGSLIEQQNVLDHQKQIYQSQRAFPETSSSLDSPVQTVQPSGGDWQEEVYQKIKTMKESYLPELREIYQRVVVKYQQHESLHQQARPEQADKFGQFKVSLNRMMDFLQIPKNKIQPALKEKVGAYEKMIIGFIHNYRPRKGMSSTQLGQLPPPHTHPMSQPQSQVTQLQSHENQINSQLHQSNLPGSVATMPQNNITSLQHNSNSGLSAGQQNMMNSMQPGSNMDPGQGNSTNSLQQVPVSSLQQNPVSTPQQTNLNSMSLQGGMNVVQQNLNILQVGSNMLQHQQLKHQQDQKMLQNQQFKQYQHRQMMQRQQSLQQQQQQHQLHQPGKQQLSAMQTHQMAQLPQMNDINDIKFRQGMGAKPGVLQQHLTPGQHSTYSHQQLKQGAPFSASSPQFFQAASPQIPQNSSPQVEQQNHAAASLTKVGTPLQSSNSPFVGPTPSPPLAPSPMPADSEKQVSGVSSVSNVASVGQQQAGAVGALTQSLAIGTPGISASPLLAEFSGLDGAQGNAAAPSGKSTVTEQPIERLTRLVKSMSSKALSAAVSDIASIVSMNDRIAGSAPGNGSRSSVGEDLVSMTNFHLQGRNLLTQDGPNGTKKMKRDTSAKPLNIVSSDGGLNDSTKHLSDSEASDMDSTATSSAKRPKIEVNHALMEEIREINNQLVDTVVNLTNEDINSTVAAEAAEGTLVKCSYTAMALSASLKSQYASAQSPVQPLRLFVPANYPSVPPIFLDKFPGECSKDDDDLSAKTKSRFSLCLRLTQPMSLREIARTWGDCARAVISEQAQKAGVGGTFSSNYGGWEDCLTFD
Length1295
PositionTail
OrganismArachis hypogaea (Peanut)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> dalbergioids sensu lato> Dalbergieae> Pterocarpus clade> Arachis.
Aromaticity0.03
Grand average of hydropathy-0.790
Instability index68.04
Isoelectric point9.09
Molecular weight142801.89
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
chromatin DNA binding	GO:0031490	IEA:InterPro
transcription coactivator activity	GO:0003713	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP23529
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             6|     319.25|      46|      48|     296|     341|       1
---------------------------------------------------------------------------
  204-  249 (52.34/10.29)	RQQV..VPQQQQQ.....QPQNA.Q.............QYLYQQQFMKPK.FQL..QSQM........HP....QqqqnL..LQ
  254-  294 (41.46/ 6.46)	QPSL..M..QSSP.....LS...................SLPQNQQSHNVqQSS..QSMIQQtsqvMRHQ.............Q
  296-  341 (85.13/21.83)	QNSI..IHQQQTP.....LTQPL.M.............MPLQQQQQLHQL.MGS..QSNVTN....MQHP....Q....M..LG
  343-  385 (41.97/ 6.64)	QNNVgdIQQQQRL.....LSQQNnL.............TNLQQLQQQQPL.LNQ..QSNLAN....MN................
  663-  716 (48.90/ 9.07)	INSQ..LHQSNLPgsvatMPQNN.I.............TSLQHNSNSGLS.AGQ..QNMMNS....MQ.PgsnmD....P..GQ
  772-  833 (49.45/ 9.27)	HQQL..KHQQDQK.....MLQNQ.QfkqyqhrqmmqrqQSLQQQQQQHQL.HQPgkQ.QLSA....MQTH....Q....MaqLP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     273.17|      46|      48|     398|     444|       2
---------------------------------------------------------------------------
  101-  131 (37.02/ 8.27)	..............PSNQAGPSNSPS....DQGLV.....MQ.....QHSInLPNQP...QQ
  398-  444 (77.87/29.99)	QQRLIgPESG...NPGMQTRQHSAHML...QQTKVPLQQHSQ.....QNGL.LPSQA...QQ
  451-  496 (57.22/17.61)	QQQLM.........PQINSQPSQSHLQlgsQQQPDPLQRDMQ.....Q.GL.QPSGSlieQQ
  508-  558 (49.45/14.09)	SQRAF.PETSsslDSPVQTVQPSGGDW...QE.EVYQKIKTM.....KESY.LPELReiyQR
  564-  609 (51.60/15.06)	QQH....ESL...H..QQARPEQADKF...GQFKVSLNRMMDflqipKNKI.QPALK...EK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     185.72|      46|      47|     876|     922|       3
---------------------------------------------------------------------------
  876-  922 (78.53/35.11)	PF..SASSPQFFQAASPqIPQNSSPQV.............EQQNHAAASLTK...VGTPLQSSNS
  923-  983 (56.11/20.54)	PFvgPTPSPPL..APSP.MPADSEKQVsgvssvsnvasvgQQQAGAVGALTQslaIGTP.GISAS
  988- 1025 (51.08/17.97)	EF..SGLDGAQGNAAAP...SGKSTVT.............EQ...PIERLTR...LVKSMSS...
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      76.81|      23|      24|     134|     156|       4
---------------------------------------------------------------------------
  134-  156 (41.32/15.63)	QILSQNI.QSSNVSSQTNLPPVSS
  159-  182 (35.49/12.31)	QTSSQNIgQNSNIQNMTGQNTVGS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     101.01|      29|      47|    1177|    1205|       5
---------------------------------------------------------------------------
 1177- 1205 (49.83/32.09)	KCSYTAMALSASLKSQYASAQSPVQPLRL
 1225- 1253 (51.17/33.17)	ECSKDDDDLSAKTKSRFSLCLRLTQPMSL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     151.10|      35|     214|     621|     655|       6
---------------------------------------------------------------------------
  621-  655 (65.79/27.63)	IHNYRPRKGMSSTQ..LGQLPPPH..THPMSQPQSQVTQ
  717-  743 (30.79/ 8.69)	........GNSTNS..LQQVPVSSlqQNPVSTPQQ..TN
  838-  873 (54.52/21.53)	INDIKFRQGMGAKPgvLQQHLTPG..QHSTYSHQ.QLKQ
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP23529 with Med15 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) GLDGAQGNAAAPSGKSTVTEQPIERLTRLV
2) GSNMLQHQQLKHQQDQKMLQNQQFKQYQHRQMMQRQQSLQQQQQQHQLHQPGKQQLSAMQTHQMAQLPQMNDINDIKFRQGMGAKPGVLQQHLTPGQHSTYSHQQLKQGAPFSASSPQFFQAASPQIPQNSSPQVEQQNHAAASLTKVGTPLQSSNSPFVGPTPSPPLAPSPMPADSEKQVSGVSSVSN
3) HLQGRNLLTQDGPNGTKKMKRDTSAKPLNIVSSDGGLNDSTKHLSDSEASDMDSTATSSAKRPKIEVNHAL
4) IETKSQNTIAANNMPSNQAGPSNSPSDQGLVMQQHSINLPNQPQQRQQILSQNIQSSNVSSQTNLPPVSSLAQTSSQNIGQNSNIQNMTGQNTVGSTIGQNSNVLDMFSGSQRQMTGRQQVVPQQQQQQP
5) KGMSSTQLGQLPPPHTHPMSQPQSQVTQLQSHENQINSQLHQSNLPGSVATMPQNNITSLQHNSNSGLSAGQQNMMNSMQPGSNMDPGQGNSTNSLQQVPVSSLQQNPVSTPQQTNLNSMSLQGGM
6) KPKFQLQSQMHPQQQQNLLQPNQIQPSLMQSSPLSSLPQNQQSHNVQQSSQSMIQQTSQVMRHQQQQNSIIHQQQTPLTQPLMMPLQQQQQLHQLMGSQSNVTNMQHPQMLGPQNNVGDIQQQQRLLSQQNNLTNLQQLQQQQPLLNQQSNLANMNQQQLGNTVPGLRQQRLIGPESGNPGMQTRQHSAHMLQQTKVPLQQHSQQNGLLPSQAQQPRPQAAQQQLMPQINSQPSQSHLQLGSQQQPDPLQRDMQQGLQPSGSLIEQQNVLD
7) KQIYQSQRAFPETSSSLDSPVQTVQPSGGD
991
766
1069
87
628
230
503
1020
954
1139
216
753
500
532










Molecular Recognition Features






MoRF SequenceStartStop




NANANA