<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23528

Description Uncharacterized protein
SequenceMPLPNQPQPRQQLLSQNIQNTIASQPNLPPVSSLAPTPIQNVGQNSSLANNVNSGMQTSQHSAHMLQQSKVPLQQQSQQNASNLLTSQTQQPQPQAPQQQMMAQVQSQPAQLQQQLGLQQQTNPLQRDMQRLQASSSLLQQQSVLDQQKQLYQSQRPIPETSSTSVDSTAQTGQPSAGDWQEEVYQKIKIMKENYLPELTEMYQKIASKLQQHDLPNQPKSDQLEKLKVFKLMLERIIAFLQVSKGSILPNYKDKMSSYEKQIINFINTNRPRKAPGQLPPTHIHSMSQSQSQVTQVQSHENQMNSQLQTTNIQGSVPMTQQNNITSMQMSVVSPAQQNMINSMQPGTNLDSGQGNAINSLQQVPVSSLQQNPVSAPQQTLTHQQLKQGNQAASPQILQHSSPQVDQQNHPPSLTKAGTPLQSANSPFVGPTPSPPLAPSPMPGDSEKPIAGLSTMSNAGNVGHQQTSSTVAPAQSLAIGTPGISASPLLAEFSGPDGPHGNALAPTSGKSSVTDQPLERLIKVMKSMSSKALTAAVSDIGSVVSMNDRIAGSAPGNGSRAAVGEDLVAMTNCRLQARNFITQDGANGTRRMKRYTNATPLNVASSAGSMNDSIKQLTLEASDLESTATSSIKKPRIEANHALLEEIREINQRLIDTVVDISEEEVDPTSAAAAADGAEGTVVKCSFVAVALSPSLKSQYASAQMSPIQPLRLLVPTNYPNCSPLLLDKFPVESSKENEDLSLKAKARFSISLRSLSQPMSLGEIARTWDICARTVISEHAQQSGGGSFSSKYGTWEDCLTSA
Length803
PositionTail
OrganismArachis hypogaea (Peanut)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> dalbergioids sensu lato> Dalbergieae> Pterocarpus clade> Arachis.
Aromaticity0.03
Grand average of hydropathy-0.555
Instability index61.93
Isoelectric point7.69
Molecular weight86548.14
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
chromatin DNA binding	GO:0031490	IEA:InterPro
transcription coactivator activity	GO:0003713	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP23528
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      51.94|      15|      15|     369|     383|       2
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   89-  103 (24.38/ 6.61)	TQQPQPQAPQQQMMA
  369-  383 (27.56/ 8.53)	LQQNPVSAPQQTLTH
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      50.37|      14|      15|     420|     433|       3
---------------------------------------------------------------------------
  420-  433 (27.71/11.33)	PLQSANSPFVGPTP
  436-  449 (22.66/ 7.97)	PLAPSPMPGDSEKP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|      88.56|      16|      16|     183|     198|       5
---------------------------------------------------------------------------
  183-  198 (26.58/16.34)	EVYQKI.KIMKENYLPE
  201-  217 (21.46/11.83)	EMYQKIaSKLQQHDLPN
  222-  235 (18.53/ 9.25)	DQLEKL.KVFK..LMLE
  236-  251 (22.01/12.32)	RIIAFL.QVSKGSILPN
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      46.60|      14|      15|     283|     297|       6
---------------------------------------------------------------------------
  283-  297 (21.07/18.41)	HIHSMsQSQSQVTQV
  300-  313 (25.53/16.80)	HENQM.NSQLQTTNI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      44.32|      12|      16|     488|     499|       7
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  488-  499 (22.69/12.07)	PLLAEFSGPDGP
  506-  517 (21.63/11.17)	PTSGKSSVTDQP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      77.94|      17|      61|       9|      25|       8
---------------------------------------------------------------------------
    9-   25 (27.10/10.07)	PRQQLLS..QNIQNTIASQ
   72-   88 (29.50/11.68)	PLQQQSQ..QNASNLLTSQ
  124-  142 (21.34/ 6.18)	PLQRDMQrlQASSSLLQQQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      53.10|      15|      31|     354|     368|       9
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  354-  368 (26.29/12.08)	QGNAINSLQQVPVSS
  388-  402 (26.81/12.48)	QGNQAASPQILQHSS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      48.06|      15|      16|     729|     743|      11
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  729-  743 (23.78/13.47)	KFPVESSKENEDLSL
  748-  762 (24.27/13.90)	RFSISLRSLSQPMSL
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP23528 with Med15 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) IINFINTNRPRKAPGQLPPTHIHSMSQSQSQVTQVQSHENQMNSQLQTTNIQGSVPMTQQNNITSMQMSVVSPAQQNMINSMQPGTNLDSGQGNAINSLQQVPVSSLQQNPVSAPQQTLTHQQLKQGNQAASPQILQHSSPQVDQQNHPPSLTKAGTPLQSANSPFVGPTPSPPLAPSPMPGDSEKPIAGLSTMSNAGNVGHQQTSSTVAPAQSLAI
2) KQLYQSQRPIPETSSTSVDSTAQTGQPSAG
3) MPLPNQPQPRQQLLSQNIQNTIASQPNLPPVSSLAPTPIQNVGQNSSLANNVNSGMQTSQHSAHMLQQSKVPLQQQSQQNASNLLTSQTQQPQPQAPQQQMMAQVQSQPAQLQQQLGLQQQTNPLQRDMQRLQASSSLL
4) SASPLLAEFSGPDGPHGNALAPTSGKSSVTDQPLERL
263
149
1
485
479
178
139
521










Molecular Recognition Features






MoRF SequenceStartStop




NANANA