<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23524

Description Uncharacterized protein
SequenceMDTNNWRPNQGAEPIMDNNDWRSQLQPESRQRIVNKIMDTLKRHLPVSGQEGLHELRKIAQRFEEKIFTAATSQPDYLRKISLKMLTMETKNPGNMAGNLPSNQGGTSNKPPDPGLVMQPQVHNAGQQHPMPLPNQPQPRQQLLSQNIQNTIASQPNLPPVSSLAPTPIQNVGQNSSVQTIPGQNSVGSTLGQNSNMQNVFPGSQRQIPGRQQVVPQQQQQSQNSQQYMYQQQQQQLQQQIMKHKIQMQQQQQQQQQQQQNLIQPNQLQSSQQSMMQTMQTSSIPSMQHNQQSNNVQQSTQSMLQQHPQVMRQQQQASIIHPQQTQMSQQSILAPQQQQQQQQQQQQQQQLLGSQANTTNMQHASMLGQQNNVGDMQQPQRLVPQQNNLSNLQQQQLLNQQNNLSNMQQQLANNVNSGMQTSQHSAHMLQQSKVPLQQQSQQNASNLLTSQTQQPQPQAPQQQMMAQVQSQPAQLQQQLGLQQQTNPLQRDMQRLQASSSLLQQQSVLDQQKQLYQSQRPIPETSSTSVDSTAQTGQPSAGDWQEEVYQKIKIMKENYLPELTEMYQKIASKLQQHDLPNQPKSDQLEKLKVFKLMLERIIAFLQVSKGSILPNYKDKMSSYEKQIINFINTNRPRKAPGQLPPTHIHSMSQSQSQVTQVQSHENQMNSQLQTTNIQGSVPMTQQNNITSMQMSVVSPAQQNMINSMQPGTNLDSGQGNAINSLQQVPVSSLQQNPVSAPQQSNVNSLSSQGGVNIIQSNLNSLQPGSNMLQQQQLKQHEQQILQSQQLKQQYQQRQLIQRQQMLQQQQQQQQQQQQQQQQQQQQLHQSAKQQLPAQLQTHQMQQHHQMNEVTDIKVRQAIGIKPGVFQQNLNSNQRSALTHQQLKQGNQAASPQILQHSSPQVDQQNHPPSLTKAGTPLQSANSPFVGPTPSPPLAPSPMPGDSEKPIAGLSTMSNAGNVGHQQTSSTVAPAQSLAIGTPGISASPLLAEFSGPDGPHGNALAPTSGKSSVTDQPLERLIKVMKSMSSKALTAAVSDIGSVVSMNDRIAGSAPGNGSRAAVGEDLVAMTNCRLQARNFITQDGANGTRRMKRYTNATPLNVASSAGSMNDSIKQLTLEASDLESTATSSIKKPRIEANHALLEEIREINQRLIDTVVDISEEEVDPTSAAAAADGAEGTVVKCSFVAVALSPSLKSQYASAQMSPIQPLRLLVPTNYPNCSPLLLDKFPVESSKENEDLSLKAKARFSISLRSLSQPMSLGEIARTWDICARTVISEHAQQSGGGSFSSKYGTWEDCLTSA
Length1302
PositionTail
OrganismArachis hypogaea (Peanut)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> dalbergioids sensu lato> Dalbergieae> Pterocarpus clade> Arachis.
Aromaticity0.03
Grand average of hydropathy-0.840
Instability index70.15
Isoelectric point9.31
Molecular weight144110.40
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
chromatin DNA binding	GO:0031490	IEA:InterPro
transcription coactivator activity	GO:0003713	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP23524
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             8|     734.81|      86|      87|     233|     318|       1
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  119-  222 (83.63/12.70)	.QPQVhnagQQ.HP..MPLP.....N...Q....PQPRQQLLSQN.......IQNTI.asQP.NlpPV.SSLAP..............TPIQNVgQNSSvqtIPG..QNsvgstlgQ...........NSN........mqN.....VF.PG.......SQRQIP.....GRQQVVPQ.QQQQS
  233-  318 (164.34/32.95)	QQQQL....QQ.QI..MKHK.....I...Q....MQQQQQQQQQQ.......QQNLI...QP.N..QL.QSSQQ..............SMMQTM.QTSS...IPSMQHN.......Q...........QSN..........N.....VQ.QS.......TQSMLQ.....QHPQVMRQ.QQQAS
  323-  405 (103.78/17.76)	QQTQM....SQ.Q......S.....IlapQ....QQQQQQQQQQQ.......QQQLL.gsQA.N..TT.NMQHA..............SML.G..QQNN...VGDMQQP.......Q.......rlvpQQN..........N.....L.............SNLQ.....QQ.QLLNQ.QNNLS
  407-  479 (86.93/13.53)	MQQQL....AN.NV.....N.....S...G....MQTSQHSAHML.......QQSKV....P.L..QQ.QSQQN.............aSNLLTS.QTQQ....PQPQAP.......Q...........QQM..........M.....AQvQS.......QPAQLQ.....Q..QL.........
  480-  543 (68.27/ 8.84)	...GL....QQ.QTnpLQRD.....M...Q....RLQASSSLLQQ.......QSVLD...QQ.K..QL.YQSQR..............PIPETS.STSV...DSTAQTG.......Q...........PSA..........G.....................................D...W
  544-  658 (69.13/ 9.06)	QEEVY....QKiKI..MKENylpelT...E....M.YQKIASKLQ.......QHDL.....P.N..QP.KSDQLeklkvfklmleriiAFLQVS.KGSI...LPNYKDK.......MssyekqiinfiNTN..........R.....PR.KA.......PGQLPP.....THIHSMSQsQSQVT
  663-  790 (77.90/11.26)	HENQM....NS.QL..QTTN.....I...QgsvpMTQQNNITSMQmsvvspaQQNMInsmQPgT..NL.DSGQG..............NAINSL.QQVP...VSSLQQN..pvsapQ...........QSNvnslssqggvN.....II.QSnlnslqpGSNMLQqqqlkQHEQQILQ.SQQLK
  794-  870 (80.83/11.99)	QQRQL..iqRQ.QM..L............Q....QQQQQQQQQQQ.......QQQQ....QQ.Q..QLhQSAKQ..............QLPAQL.QTH......QMQQH.......H...........QMN..........EvtdikVR.QA....igiKPGVFQ.....Q.............
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      49.66|      14|      15|     919|     932|       3
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  919-  932 (27.72/12.53)	PLQSANSPFVGPTP
  935-  948 (21.95/ 8.12)	PLAPSPMPGDSEKP
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      44.32|      12|      16|     987|     998|       4
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  987-  998 (22.69/14.88)	PLLAEFSGPDGP
 1005- 1016 (21.63/13.77)	PTSGKSSVTDQP
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      35.84|      10|      16|      66|      75|       6
---------------------------------------------------------------------------
   66-   75 (17.39/11.03)	KIFTAATSQP
   84-   93 (18.44/12.22)	KMLTMETKNP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      48.06|      15|      16|    1228|    1242|       7
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 1228- 1242 (23.78/14.08)	KFPVESSKENEDLSL
 1247- 1261 (24.27/14.54)	RFSISLRSLSQPMSL
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      78.71|      26|      27|    1034|    1059|       9
---------------------------------------------------------------------------
 1034- 1051 (24.24/13.52)	....................AAVSDIGSVVSM.NDRIAG
 1052- 1076 (38.22/25.99)	SAPG.NGSR...........AAVGE..DLVAMtNCRLQA
 1081- 1111 (16.24/ 6.38)	TQDGaNGTRrmkrytnatplNVASSAG...SM.ND....
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP23524 with Med15 domain of Kingdom Viridiplantae
Unable to open file!