<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23517

Description Uncharacterized protein
SequenceMLGQGSPNSLSDMMVGTGPCNYGLDHAAAGDEECSHACRLEEAGLEQRDDPIRDEEEGCAVSAGGTSLRRRLTEGDATVLFAGCAPGMGDAAGERKAIRGANSVGAEAYRVENLSNRVEGIVMLLEKVQGVERLDGHRNDACHPIAGGGNADLAKAGLGLDSQPLTLTSPSYSRRLEGAVAAGLDSTEPPTSQVGISHVQRTHGHVCFLAGALLGVAVVRSLLGIFPSLPACLPTCLPKSIVWTVPHSLRSPLVRFLPPASPLNFCLSPSLAIHLSASLSCHVARSETYMLEFGFGTMDNVVDSLNNAYQDFIAAASTVLEAKESAGAQKTTATDVALENFKQKWELFRVACDQAEEFVESLKQRIGSECLVDEATGAGKPGQATMTGLPPISAVRLEQMSKAVRWLVIELQNGSGAAAANSSQSHASAPFDARFSEDSAP
Length441
PositionTail
OrganismArachis hypogaea (Peanut)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> dalbergioids sensu lato> Dalbergieae> Pterocarpus clade> Arachis.
Aromaticity0.05
Grand average of hydropathy-0.089
Instability index54.31
Isoelectric point5.11
Molecular weight46269.62
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
cold acclimation	GO:0009631	IEA:InterPro
leaf senescence	GO:0010150	IEA:InterPro
regulation of transcription, DNA-templated	GO:0006355	IEA:InterPro
root development	GO:0048364	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP23517
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      77.31|      22|      23|      58|      79|       1
---------------------------------------------------------------------------
   58-   79 (37.67/23.77)	GCAVSAGGTSLRRRLTEGDATV
   83-  104 (39.64/25.43)	GCAPGMGDAAGERKAIRGANSV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      75.68|      22|      23|     159|     180|       2
---------------------------------------------------------------------------
  159-  180 (38.88/26.73)	GLDS..QPLTLTSPSYSRRLEGAV
  183-  206 (36.80/24.91)	GLDStePPTSQVGISHVQRTHGHV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      88.77|      26|      27|     223|     249|       3
---------------------------------------------------------------------------
  223-  249 (47.07/32.52)	LGIFPSlPAC.LPTCLPKSIVWTVPHSL
  253-  279 (41.70/24.13)	LVRFLP.PASpLNFCLSPSLAIHLSASL
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP23517 with Med32 domain of Kingdom Viridiplantae
Unable to open file!