<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23516

Description Uncharacterized protein
SequenceMGSIQVAEAEEQDTHTVFVAVGNNIHKTQQLLHWASHNFPSKSICLLHVHHPHPIDSSPDRNPYRDETRSHSFLDNESKKIHELLDQYVATLVQTGVRAHKLLIEMDNIEKGIMEAIAQHNIRLLVIGAAADRYNLGYKSQTFVILHAFIAFLCPYPLEITGNCTVKLRKLAEQESTKIIPVHKQAVPSCNIWFICNGNIKCTRVDSKRTPEIETAPPLLVHNSNAEAEQSQKFEYESIPNGLEHLDSDDVEEIETVSSHSSLRSKWSSISVADSSKLSGLLFCEEEVDGEIEDKSEINGRLEESTRDSKSMRRKEFEEALKQWKVKESSLEDEALEMESLCAKEKNKRREVEEQLAREKEELQKTKNQQDEIMYELQTVQEQNSALANQLCETQEAAKELEEKILSAVDLLISFKEKRDRLQIECANAVRQVRVLREFGKSHTSFSYAVEFPVFSFMEINQATNDFDPSWKIGEGRYGSVYKGVLRNMHVAIKMLPSYGCHSQLEFERQVAVLSRVRHRNLLTLIGTCAESRSLVYEYLNNGSLEGHLARKEKSPLPWQIRISVAADICSALIFLHSSEPSIIHGNLKASKVLLDANFVAKLADIGIHGLVEKNVDSADTTTTHNKPNESLAYVDPEYLATGKFTPESDVYSFGILLLQLLTGRPLLGLVRDVKCALEKDNLEAVLDFSAGEWPLDQTIHLAYLALRCCDKTWLNRPDLTSDIWDVLEPFRTTCMNMPPYLTSKKHRRTPSHFVCPIVQEVMEDPYIAADGFTYEAEAIREWLDSGHDTSPMTNLKLEHTNLVPNYALHNAIQEWQQLQ
Length820
PositionTail
OrganismArachis hypogaea (Peanut)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> dalbergioids sensu lato> Dalbergieae> Pterocarpus clade> Arachis.
Aromaticity0.07
Grand average of hydropathy-0.411
Instability index47.67
Isoelectric point5.47
Molecular weight93130.41
Publications









Function






Annotated function

Functions as an E3 ubiquitin ligase.



GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP23516
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      87.87|      28|      31|      69|      99|       1
---------------------------------------------------------------------------
   71-   98 (47.35/30.35)	HSFL...DNESKKIHELLDQYVATLVQTGVR
  100-  130 (40.52/22.92)	HKLLiemDNIEKGIMEAIAQHNIRLLVIGAA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     121.32|      32|      32|     294|     325|       2
---------------------------------------------------------------------------
  294-  325 (52.78/34.21)	DKSEI..........NGRLE.ESTRDSKSMRRKEFEEALKQWK
  328-  360 (44.39/27.59)	ESSLE..........DEALEmESLCAKEKNKRREVEEQLAREK
  369-  403 (24.15/11.65)	QQDEImyelqtvqeqNSALA.NQLCETQEA.AKELEE......
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     101.20|      30|      36|     154|     183|       4
---------------------------------------------------------------------------
  154-  183 (54.12/32.37)	CPYPLEITGN..CT.VKLRKLAEQESTKIIPVH
  190-  222 (47.08/27.28)	CNIWFICNGNikCTrVDSKRTPEIETAPPLLVH
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      54.89|      17|     300|     230|     246|       5
---------------------------------------------------------------------------
  230-  246 (32.44/19.57)	QSQKFEYESIPNG.LE.HL
  531-  549 (22.45/11.49)	ESRSLVYEYLNNGsLEgHL
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP23516 with Med32 domain of Kingdom Viridiplantae
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