<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23512

Description Uncharacterized protein
SequenceMNQVGGTKGPVVEVVEDEEPEAVAEAQEKNEAVELSGEQKQPPVENPMEEDSVTTTPATVFCIRLKQPKSLLLHKMSVPEVCRNFSAVSWCGKLNAIACASETCARIPSSTANPPFWIPIHIVIPERPTECAVFDVLADSPRDSVQFIEWSPTSCPRALLIANFHGRVTIWTQPSQGPANLVRDTSYWQLEHEWRQDIAVVTKWLSGVSLYRWLSSKSSGAANSKSIFEEKFLSQQSQTSARWPNFLCVCSVFSSGSVQLHWSQWPHCQNAAPVRWFCTSKGLLGCGPSGIMDADAIITDSGAMHVAGVPIVNPSTVVVWEVMPGPGNGFQATPKTSINNCAPPLSPPNWSGFAPLAAYLFSWQDYLISEEKRGKKLTDQNIGDSIPLHCSPVSNFSAYVSPEAAAQSSAATTWGSGVTAVAFDPTRGGSVIAVVIIEGQYMSPYDPDEGPSVTGWRVQRWESSLQHVVLHPIFGNPTSSMGGQPPMQTVWQSKVDLSIPPTNDFKNHRTHAVGMKTNVQKVSESSFKGVTFDPFDLPSDVRTLARVVYAAHGGEIAIAFLRGGVHIFSGPNFAPVDNFQITVGSAIAAPAFSSTSCCLASVWHDTCKDQTILKIIRVLPPAIPTSQVKANSSTWERAIAERFWWSLLVGVDWWDAVGCTQSAAEDGIVSLNSIIAVLDADFHSLPSAQHRQQYCPSLDRIKCRLLEGANAQEVRAMVLDMQARLLLDMLGKGIESALIDPSVLVPDPWQVSSDTLSRIDAQAVSVEPALMPSIQAYVDSVLDLASHFITRLRRYASFCRTLATHAVTAGTASNRNIVPSSAAQSSATPAPSQGAQNGTTSSSGTPQMQAWVQGAIAKISNPADGVSNPTPNPPITGPPSFMPISVNTGTFPGTPAVRLIGDCHFLHRLCQLLLFCFFFRRAQLPRYAGGAHRTADANAQKPQPNASAPGNVDEVAKPVSTVVKSDDGQTNRIGQVVPGAKGSEEPTSGRSRVGTGNAGQGYTFEEVKVLFLILMDLCRRTSGLQHPLPVSQVGSSNIQVRLHYIDGNYTVLPEVVEASLGPHMQNMPRPRGTDAAGLLLRELELHPPAEEWHRRHMFGGLSSDPNDVGPANKLVSSSPRDLSSLENCDVYHGAHAIWPRKRRMSEREAAFGLNSSVGLGGYLGIMGSRRDVVTALWKTGLEGVWYKCIRCLRQTCAFTSPGSTNPPSQNDREIWWISRWTHGCPICGGTWVRVV
Length1235
PositionTail
OrganismArachis hypogaea (Peanut)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> dalbergioids sensu lato> Dalbergieae> Pterocarpus clade> Arachis.
Aromaticity0.08
Grand average of hydropathy-0.158
Instability index46.53
Isoelectric point6.47
Molecular weight133801.12
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of transcription, DNA-templated	GO:0006355	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP23512
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     445.45|     111|     168|     313|     426|       1
---------------------------------------------------------------------------
  313-  426 (191.35/124.08)	NPSTVV........VWE.....VMPGPGNGFQA..TPKT..SINNCAPPLSPPNWSGFAP.LAAYLFSWQDyLISE.EKRGKKLTDQNIGDSIPLH...C..SPVSNFSayVSPEAAAQSSAATTWGSGVTAVAFDPT
  476-  595 (150.11/87.58)	NPTSSMggqppmqtVWQskvdlSIP.PTNDFKNhrTHAV..GMKTNVQKVSESSFKG....VT...FDPFD.LPSD.VRTLARVVYAAHGGEIAIA...FlrGGVHIFS...GPNFAPVDNFQITVGSAIAAPAFSST
  740-  827 (104.00/58.11)	DPSVLV..................PDP...WQV..SSDTlsRIDAQAVSVEPA....LMPsIQAYVDSVLD.LASHfITRLRR..YASFCRTLATHavtA..GTASNRN..IVPSSAAQSSA................
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     143.03|      41|     240|     846|     897|       2
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   90-  133 (76.81/29.76)	WC.GklnAIACASETCARIPSSTANPPF.....WIPIHIVIPERPTECAV
  851-  897 (66.22/44.53)	WVqG...AIAKISNPADGVSNPTPNPPItgppsFMPISVNTGTFPGTPAV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     123.78|      36|     570|     603|     659|       3
---------------------------------------------------------------------------
  614-  659 (57.55/50.76)	KIIRVLPPAIP.TSQVKAN.SSTWERAIaerfWWsllvgVDWWDAvGC
 1187- 1224 (66.23/23.20)	KCIRCLRQTCAfTSPGSTNpPSQNDREI....WW.....ISRWTH.GC
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     159.94|      51|     184|      36|      88|       6
---------------------------------------------------------------------------
   36-   88 (82.02/58.13)	SGEQKQPPV..ENPMEEDSVTTT..PaTVFCI.RLKQPKSLLLHKMSVPEvCRNFSAV
  219-  274 (77.93/46.97)	SGAANSKSIfeEKFLSQQSQTSArwP.NFLCVcSVFSSGSVQLHWSQWPH.CQNAAPV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     215.77|      68|     931|     134|     204|       8
---------------------------------------------------------------------------
  134-  204 (114.30/73.53)	FDVLADSPRDsVQFIEWSPTSCPRAL.LIAN...FHGRVTIWTQP...SQGPANLVRDTS.....YWQLEHEwRQDIaVVTKW
 1098- 1177 (101.47/53.74)	FGGLSSDPND.VGPANKLVSSSPRDLsSLENcdvYHGAHAIWPRKrrmSEREAAFGLNSSvglggYLGIMGS.RRDV.VTALW
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP23512 with Med16 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) GGAHRTADANAQKPQPNASAPGNVDEVAKPVSTVVKSDDGQTNRIGQVVPGAKGSEEPTSGRSRVGTGN
2) GGTKGPVVEVVEDEEPEAVAEAQEKNEAVELSGEQKQPPVENPMEEDS
3) IVPSSAAQSSATPAPSQGAQNGTTSSSGTPQ
929
5
817
997
52
847










Molecular Recognition Features






MoRF SequenceStartStop




NANANA