<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23490

Description Uncharacterized protein
SequenceMASPAWLNQDPQPPPAEPPLPAAPSSTPNPNAPAASFSYGMHQNVNASGNPQQSTHPGMKSNTTVMPTAVQPPVPGLPPHAAPSFSYNIWQSGPAFSSNQLTQSNTNKSDPVVQDVSKASSVSSVPHSVPAHTSIMPPPSDPNFRPTTSWMPTPLSFPGHPVMPGAPGNPAPPGLTSSIISTNLAAPPSTVSSSAAPLRPNMPAAAIASDPTLTQKGTPYASMPPMVAPPPQGFWLQPPQMSGILRPPFLQYPAAFPGPFPYPVRGVNPPAVTLPDSQPPGVTPVNATAATSAPSASDNQLRQGTDLQTDLISGPADDKKSNVTQNADAANEKLDAWTAHKTETGVVYYYNALTGESTYDKPVGFKGESHQIAVQPTPVSMVDIPGTDWMLVSTSDGKKYYYNKQTKTSSWEVPNEVAELKKKQDGDVTKDHSMSVPNTNVLSDRGSGMVTLNTSAINTGGRDAAALKPSSVQTSSSALDLIKKKLQESGMPVASSSVPVSPVQTGSESNGSKAAESAAKGLQNDNKDKQKDANGDANTSDTSSDSEDEDSGPSKEECIIQFKEMLKERGVAPFSKWEKELPKIVFDPRFKAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDEASEDIDHNTDYQTFRKKWGNDPRFEALDRKERQHLLSERVLPLKKAAEQKAQASRIAAATCFKSMLKERGDISINSRWSRVKESLRDDPRYKSVRHEDRELLFNEYISELKATEHAAERENKAKREEQDKLRERERELRKRKEREEQEMERVRVKIRRKEAITSFQALLVETIKDPLASWTESKHKLEKDPQGRATNPDLDPADTEKLFREHIKMLQERCAHDFRTLLAEVLTLEAASHEGEDGKTVLNSWSTAKRLLKSDPRYNKVPRKDREPLWRRYAEDVQRRQKSSQEEKNADTKGRNTLESIKLALEAGRSHERR
Length955
PositionUnknown
OrganismArachis hypogaea (Peanut)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> dalbergioids sensu lato> Dalbergieae> Pterocarpus clade> Arachis.
Aromaticity0.06
Grand average of hydropathy-0.844
Instability index55.54
Isoelectric point8.57
Molecular weight105186.35
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP23490
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             6|     393.27|      60|      64|     156|     219|       1
---------------------------------------------------------------------------
   10-   51 (55.57/20.56)	.................DP..QPPP..........AE.PPLPAAPSSTP..NP...NA.........PAASFSygMHQNVNASGNP
   55-  107 (62.36/23.98)	THPGMksntTVMPTAVQPP..VP.............GlPP.....HAAPsFSY...NI.........WQSGPA.fSSNQLTQSNTN
  128-  154 (46.72/16.10)	SVPAH...tSIMP.........................PPS..........DP...NF..............R....PTTSWMPTP
  156-  219 (108.75/53.44)	SFPGH....PVMPGAPGNP..APPGLTSsiisTNLAA.PPSTVSSSAAP.LRP...NM.........PAAAIA..SDPTLTQKGTP
  222-  261 (59.73/22.65)	SMP......P.MVA....P..PPQGF.......WLQ..PPQM....SGI.LRPpflQY.........PAAFPG..PFP........
  263-  325 (60.15/22.86)	..PVR....GVNPPAVTLPdsQPPGVTP....VNATA.ATSAPSASDNQ.LRQ...GTdlqtdlisgPADDKK..SN..VTQ....
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             6|     405.15|      66|      66|     614|     679|       2
---------------------------------------------------------------------------
  547-  610 (67.85/41.00)	............EDEDSGPSKEECIIQFKEMLKE..RGVAP.FSKWEKELPKIV.......FDPRFKA....I.PsysarRSLFEHYVKTR.
  614-  675 (93.16/59.29)	............ERKEKRAAQKAAIEGFKQLLDEASEDIDH.NTDYQTFRKKWG.......NDPRFEA....L.D.....RKERQHLLSERV
  676-  742 (90.97/57.71)	LPLK.....kaaEQKAQ.ASRIAAATCFKSMLKERG.DISI.NSRWSRVKESLR.......DDPRYKS....V.R.....HEDRELLFNEYI
  743-  787 (36.25/18.16)	SELKatehaaerENKAKREEQD.......KLRERERE...................................LrK.....RKEREEQEMERV
  789-  848 (64.33/38.46)	................VKIRRKEAITSFQALLVETIK..DP.LASWTESKHKLE.......KDPQGRAtnpdL.D.....PADTEKLFREHI
  849-  910 (52.60/29.98)	KMLQ......erCAHDFRTLL.AEVLTL........EAASHeGEDGKTVLNSWStakrllkSDPRYNK....V.P.....RKDREPL.....
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      99.88|      26|      49|     337|     362|       3
---------------------------------------------------------------------------
  337-  362 (49.49/36.06)	WTAHKTETGVVYYYNALTGESTYDKP
  389-  414 (50.39/36.87)	WMLVSTSDGKKYYYNKQTKTSSWEVP
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP23490 with Med35 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) EVPNEVAELKKKQDGDVTKDHSMSVPNTNVLSDRGSGMVTLNTSAINTGGRDAAALKPSSVQT
2) LWRRYAEDVQRRQKSSQEEKNADTKGRNTLESIKLALE
3) MASPAWLNQDPQPPPAEPPLPAAPSSTPNPNAPAASFSYGMHQNVNASGNPQQSTHPGMKSNTTVMPTAVQPPVPGLPPHAAPSFS
4) PVRGVNPPAVTLPDSQPPGVTPVNATAATSAPSASDNQLRQGTDLQTDLISGPADDKKSNVTQNADAANEKLDA
5) SGPAFSSNQLTQSNTNKSDPVVQDVSKASSVSSVPHSVPAHTSIMPPPSDPNFRPTTSWMPTPLSFPGHPVMPGAPGNPAPPGLTSSIISTNLAAPPSTVSSSAAPLRPNMPAAAIASDPTLTQKGTPYASMPPMVAPPPQGFWLQPPQ
6) SSALDLIKKKLQESGMPVASSSVPVSPVQTGSESNGSKAAESAAKGLQNDNKDKQKDANGDANTSDTSSDSEDEDSGPSKEECII
7) TEHAAERENKAKREEQDKLRERERELRKRKEREEQEMERVR
412
910
1
263
92
476
748
474
947
86
336
240
560
788










Molecular Recognition Features






MoRF SequenceStartStop




1) LIKKKL
2) LWRRYA
3) SIKLALEA
481
910
941
486
915
948