<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23481

Description Uncharacterized protein
SequenceMQRYHAGSCTSAVNNSAIGGPSARDGGRSDSSTLPANFPLNSRRQPQLAPYKLKCDKEPLNSRLGPPDFHPQTPNCPEETLTREYLLSGYKETVEGLEEAREISLSQVQTFNKTVVLNCKEAIRKHLRAINESRAQKRKAGQVYGVPLSGSQLAKSGVYPELRPCGEDFRKKWIEGLSQPHKRLRSLADHVPHGYKRTSLLEVLIKNNVPLLRATWFIKVTYLNQVRPGSGSISSGAADKIQLARSEVWTKDVINYLQSLLDEFFSKNASHSTHNKERSPQMSYAGSLQHKNDPLLSISDGEEPSLHFRWWYIVRLLQWHNSEGLLLPSLVIDWVLNQVQEKERLEVWQLLLPIIYGFLETVVLSQTYVRTLAGIALRVIRDPAPGGSDLVDNSRRAYTTYALIEMIRYLILAVPDTFVALDCFPLPSSVVSHSINDGSFALKLNEVSGKVKNSSDDFGHIISCIQKHAEDLAKAASPGYAGHCLAKVANALDKSLVLGDLRGAYTFLFEDPCDGTVSESWVGRVSPCLRLSLKWFGTVSTSLVYSVFFLSEWATCEFRDFSATPPCDIKFTGRRDLSQVHMAVRLLNMKMKDMKISPRQMNGSTHRVSYLEKCSNQRHNQGYVGNVSKVKSSSKSNSFSVMFESPGPLHDIIVCWIDQHVVHKGEGLKRLHLFMVELIRAGILNPLAYVRQLIVSGIMDLNANLADLERRKRHYCILKQLPGHFIRDALQESGIVEGPQLDEALQTYLNERRLILRVPSSGKQDDASSANISAIKRKGHPASVKSGASTVTTATDPSKTTLSKSASSKNAKDGVSIDELKGAIMALLQLPSSIANLNTTASDESEGSVRRPILPNSKIDQVEATPGCEECRKAKRQKLSDERSSFALVLSDDDDTWWVKKGLKSSEPPKVDQPPKSTKQVTKSRQKNVRKTQSLAQLAASRIEGSQGASTSHVCDNKVSCPHHRTGTDGDNMRPADSIRTSQCGDIVSVGKSLKQLRFVEKRAVASWLIMVVRQSVEETEKNVGKVGQFGRPFPTADDRSSIRWKLGEDELSAMLYLMDNSDDLVSTVKFLLWLLPKVPNSSNSTIHSGRNVMMLPRNVENQVCDVGESFLISSLRRYENILVAADLIPDTLTSAMHRAAAIIASNGRISGSGVLAFARYLLKKYGSVTSVIEWDKTFKTTCDARLSSELERSVDGELGLVPSGVEDPDDFFRQKISGGRLPSRVGSGMRDIVQRSVEEAFHYLFGKDRKAFASGTPKGPALEKWDNGYQIAQQIVMGLIDCIRQTPGAAQEGDPSLVSSAISAIVGSVGPTLAKMPDFSPGNNHSNTTLATSSLNYAKCILRMHVTCLCLLKEVLGERHSRVFEIALATEASNALAGVFAPSKASRAQFQISPDSHDTGSTTPNDVGSNSNKVMVSRPTKIAAAVSALVVGAIIHGVTSLERMVSILRLKEGLDVVQFARSTRSNSNGNARSVGSFKADSSIEVHVHWFRLLVGNCRTMCEGLVVELLGEPSIIALSRMQRMLPVSLVFPPAYSIFAFVKWRPFILSANVATREDINQLYQSLTVAITDAIKHLPFRDVCFRDCQGLYDLMAVDASDAEFANLLEVNGSDMHLKSRAFAPLRSRIFLNAMIDCKLPQNLYTKDEGSRISDESKLQDKLVHVLDTLQPAKFHWQWVALRLLLNEQALIEKLEAHDGSIADAIQMTSPSAEKAAAAAAASENENNFIEILLTRLLVRPDAAPLFSELVHLFGRSLEDSMLLQAKWFLGGQDVLFGRKTIRQRLQNIAEGKGLSVKAQFWEPWGWCSSSTDPVTVKGDKKFDTTGLEEGEVVEDGMDSKKGLKGSSQASDCEGTGGDQQHVTEKALIELILPCIDQGSDESRNSFASDLIKQLNNIEQQIAAVTRGVSKPVGSTSPGIEGQTNKVSRKAMKGGSPGLARRQVVVTDSSPPSASALRASMSLRLQLLLRFLPILCTDREPSVRNMRYSLASVILRLLGSRLVHEESSLLKREVDSSTEAATGATLDSSAEGLFDRLLLVLHGLLSTHPPSWLRLKPGSKTINEPTRDFSGVDRDLLETLQNDLDRMQVPDTIRWHIQAAMPVFFPSLRCSFSCQPPPIPPSALACLQPSFTNPSTAPQRNAVPLSRIATNASGKSKQQQDNNDLEVDPWTLLEDGAGSCPSASNTVSIGTGDPANIKAASWLKGAVRVRRTDLTYVGPVDDDS
Length2221
PositionKinase
OrganismArachis hypogaea (Peanut)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> dalbergioids sensu lato> Dalbergieae> Pterocarpus clade> Arachis.
Aromaticity0.06
Grand average of hydropathy-0.264
Instability index47.05
Isoelectric point8.68
Molecular weight244003.27
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
transcription coregulator activity	GO:0003712	IEA:InterPro

GO - Biological Process
regulation of transcription by RNA polymerase II	GO:0006357	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP23481
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      66.60|      17|      19|      39|      57|       1
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   39-   55 (33.73/21.46)	PLNSR.RQPQLAPYKLKC
   59-   76 (32.87/14.16)	PLNSRlGPPDFHPQTPNC
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      39.00|      12|      19|    1112|    1123|       2
---------------------------------------------------------------------------
 1112- 1123 (19.51/13.15)	LISSLRRYENIL
 1133- 1144 (19.49/13.12)	LTSAMHRAAAII
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     409.01|     137|     419|    1263|    1414|       3
---------------------------------------------------------------------------
 1263- 1414 (207.42/171.63)	LEKWDNgyQIAQQIVMGLIDCIR.QTPGAAQEGDPSLVSSAISAIVgsVGPTLAkmPDFSPGNNHSNTTLATSSLNYAKCILRMhvtclcllKEVL.GER..HSRVFEIAlATEASNALAGVFAP...SKASRAQFQISPDSH.DTGSTTPNDV...GSNSNK
 1692- 1839 (201.59/128.94)	LEAHDG..SIADAIQMTSPSAEKaAAAAAASENENNFIEILLTRLL..VRPDAA..PLFSELVHLFGRSLEDSMLLQAKWFLGG........QDVLfGRKtiRQRLQNIA.EGKGLSVKAQFWEPwgwCSSSTDPVTVKGDKKfDTTGLEEGEVvedGMDSKK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      79.29|      22|     414|     164|     187|       4
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  164-  187 (38.60/32.59)	PCGEDFRKKWieGLSQPHKRLRSL
  566-  587 (40.68/27.35)	PCDIKFTGRR..DLSQVHMAVRLL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      65.55|      19|      21|    1625|    1643|       5
---------------------------------------------------------------------------
 1625- 1643 (34.47/22.91)	SRIFLNAMIDCKLPQNLYT
 1648- 1666 (31.08/19.89)	SRISDESKLQDKLVHVLDT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     471.05|     155|     167|     730|     895|       7
---------------------------------------------------------------------------
  730-  895 (231.29/174.28)	LQESgivEGPQLDE...ALQTYLNERRLILRVPSSGKQDDASSANISAIKRKGHPASVKSGASTVTTATDPSKTTLSKSASSKNAKDGVSIDE.LKG.AIMALLQLPSSIANLNTTASDESEGSVrrpilpnSKIDQV.EATPGCEEcRKAKRQKLS.DERSSFALVLSDDDD
  903- 1064 (239.76/153.59)	LKSS...EPPKVDQppkSTKQVTKSRQKNVRKTQSLAQLAASRIEGSQGASTSHVCDNKVSCPHHRTGTDGDNMRPADSIRTSQCGDIVSVGKsLKQlRFVEKRAVASWLIMVVRQSVEETEKNV.......GKVGQFgRPFPTADD.RSSIRWKLGeDELSAMLYLMDNSDD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      42.35|      15|      19|      78|      94|       9
---------------------------------------------------------------------------
   78-   94 (21.92/20.68)	EEtlTREYLLS...GYKETV
   98-  115 (20.43/11.62)	EE..AREISLSqvqTFNKTV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      87.25|      26|      30|    1542|    1571|      10
---------------------------------------------------------------------------
 1542- 1571 (37.26/37.15)	KWRPFilsANVATReDINQLYQSLTVAITD
 1574- 1599 (49.99/34.37)	KHLPF...RDVCFR.DCQGLYDLMAVDASD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      46.36|      14|      19|    1895|    1908|      11
---------------------------------------------------------------------------
 1895- 1908 (22.65/16.11)	IEQQIAAVTRGVSK
 1917- 1930 (23.71/17.25)	IEGQTNKVSRKAMK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      68.21|      21|    1362|     303|     326|      12
---------------------------------------------------------------------------
  303-  326 (32.56/30.22)	EPSlHFRW.WYIVRLLQwhNSEGLL
 1668- 1689 (35.65/19.74)	QPA.KFHWqWVALRLLL..NEQALI
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP23481 with Med12 domain of Kingdom Viridiplantae
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