<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23476

Description Uncharacterized protein
SequenceMELLHPLPPHHHDPPLAADALHRYSPPPSTSSRVEFHALATPPEAAAEEDKVHVAVGKSVGKGATLLQWAFSNFTNPHILLLHVHQPSPFIPTLLGKLPASQANPEVVSAFRREEKEQAMRLLDNYLRICRAAKVKASFMMTEADQVQKGIVDLVVGHNIRRLVIGAIPEGWMKVKRNSRKANYAAKNAPPFCKIWFIYRGKHIWTREASEKPCSLSPCETIETEGTFAAESTTSSGPLPQNSAESSSDTHLEAEEERVNSQLVEVKQEADEAADESFVELLKLEAEATEAIRKVNLFESAHAQEVKLRQEAEDELRTTVKDQQKLLDENEEIGSELQRTMRSIAILNSCVQETDHRRDAAEDELSLIQASISTLWHEKQQIRRQKMEAIRWLDRWKSRGQVGVAHCNGVVGFAEELPEIAEFSLLDIQNATCNFSESFKIKEGGYGAIYKGEMLGRTVAVRKLHSHNLQAPSQFHQEVQVLGSFQHPHLLTLLGVCPEAWSLVYEYLPNGSIQDSLLRRSNISPLTWNIRTRWIAEIASAICFLHSSKPETIIHGDLNLDIILLDSALSCKICEFGFSRLVTEDSLYLPSFGLETEPRGSFTYTDPEFQRTGLTPKSDIYSFGLIILQLLTGRTPVGLVGEVQKAVTYGRLSSILDSSVGEWPLAVATRLADLGLQCCQQYSRDRPELTPSLVRELEQLHVSEERPVPSFFLCPILQEIMHDPQVAADGFTYERDAITEWLENGHETSPMTNLKLNHLYLTPNHALRLAIQEWLCKP
Length778
PositionTail
OrganismArachis hypogaea (Peanut)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> dalbergioids sensu lato> Dalbergieae> Pterocarpus clade> Arachis.
Aromaticity0.07
Grand average of hydropathy-0.311
Instability index49.18
Isoelectric point5.61
Molecular weight87343.19
Publications









Function






Annotated function

Functions as an E3 ubiquitin ligase.



GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP23476
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      69.71|      20|      25|     483|     503|       1
---------------------------------------------------------------------------
  483-  503 (33.77/25.38)	GSFQHPhLLTLLGVCPEAWSL
  511-  530 (35.94/21.58)	GSIQDS.LLRRSNISPLTWNI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      35.27|      11|      25|     283|     293|       2
---------------------------------------------------------------------------
  283-  293 (17.13/10.09)	KLEAEATEAIR
  307-  317 (18.14/11.14)	KLRQEAEDELR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      61.67|      18|      30|     575|     594|       3
---------------------------------------------------------------------------
  575-  594 (27.92/23.49)	EFGFSRLVTEDSLYlpSFGL
  608-  625 (33.75/20.91)	EFQRTGLTPKSDIY..SFGL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      53.95|      15|      25|      65|      79|       5
---------------------------------------------------------------------------
   65-   79 (28.69/16.64)	TLLQWAFSNFTNPHI
   93-  107 (25.26/13.85)	TLLGKLPASQANPEV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      70.17|      22|      25|     336|     359|       8
---------------------------------------------------------------------------
  336-  359 (32.59/26.26)	ELQRTMRSIAILNSCVQETdhRRD
  364-  385 (37.58/22.89)	ELSLIQASISTLWHEKQQI..RRQ
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP23476 with Med32 domain of Kingdom Viridiplantae
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