<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23475

Description Uncharacterized protein
SequenceMAEKQVIIVVESTAALGPYWDTILVDYIDKIIRSLVGTDSTGQKPSVSNVEFALATFNTHGCYSSVLVQRTGWTRDPDIFFLWLSAIPFTGGGFNDAAIAEGLAEALMMFPSSQDGGPNQQNVDMHKHCILIAASNPYPLQTPVYVPRLPNIEQSETIDSDAGNRLYDAEAVAKAFPQLSVSLSVICPKQLAKIKAIYNAGKRNNRAADPPVDVKVSHFLVLISESFKEARAALSRSGVTSVPSNQSPVKVDAVSGIPVTGAPPTSMPSVNGSIPNRQPISGGNVVPATVKVEPIPVTTMVPGPGFPHNSSAPRATANNQGVPSLQTSSPSSMTQDIMTSNENAQDTKPTVSMLQPMRPVNSAQANMNILNKVSQARQVMNSAALGSGTSMGIQSMGQTPVAMHMSNMISSGMASSIPAPQNVFSSGQSGITSISSSGPLNGPAQVAQNSGLSSIASATSNMTGSPNIGISQPMGNVQGAVSMGQQVPGMSQGNPSGAQMVQGGVNMNQNMINNGLGPSVVSSGTGTMIPTPGMSQQVQPGMQPLVNNNAAANMSLPQQTSGGMQSTQSKYVKVWEGSLSGQRQGQPVFITKLEGYRNASASETLAANWPPVMQIVRLISQDHMNNKQYVGKADFLVFRAMNPHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAFRLIGMLFPGGRMTLNDSCS
Length694
PositionUnknown
OrganismArachis hypogaea (Peanut)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> dalbergioids sensu lato> Dalbergieae> Pterocarpus clade> Arachis.
Aromaticity0.05
Grand average of hydropathy-0.134
Instability index47.31
Isoelectric point8.82
Molecular weight72927.16
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP23475
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             6|     202.31|      36|      36|     387|     422|       1
---------------------------------------------------------------------------
  237-  269 (27.34/ 6.71)	.....SGVTS.VP....................SNQ.SpvkvdavSG.IP...VTGAP.P.....TSMPS
  278-  304 (30.94/ 8.54)	QP.ISGG..NVVPATVK...............vE...P.......IP.VT...TMVPG.P..........
  406-  444 (45.39/15.88)	SNMISSGMASSIPAPQN.............vfsSGQ.S........G.IT...SISSSgP.....LNGPA
  445-  490 (30.85/ 8.49)	QVAQNSGLSSIASATSN........mtgspnigISQ.P.......MGnVQgavSMGQQ.V.....PGM..
  509-  542 (37.19/11.71)	QNMINNGLGPSV........................vS.......SG.TG...TMIPT.PgmsqqVQPGM
  543-  588 (30.58/ 8.36)	QPLVNNNAAANMSLPQQtsggmqstqskyvkvwEGS.L.......SG..Q...RQGQ..P.....V....
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      46.11|      15|      17|     330|     345|       2
---------------------------------------------------------------------------
  330-  345 (22.90/13.68)	PS.SMTQDiMTSNENAQ
  349-  364 (23.21/ 9.86)	PTvSMLQP.MRPVNSAQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      56.56|      19|      35|     161|     184|       3
---------------------------------------------------------------------------
  161-  184 (22.69/30.75)	DAGNRlyDAEAvakAFPQLSVSLS
  199-  217 (33.86/23.70)	NAGKR..NNRA...ADPPVDVKVS
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP23475 with Med25 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) ARQVMNSAALGSGTSMGIQSMGQTPVAMHMSNMISSGMASSIPAPQNVFSSGQSGITSISSSGPLNGPAQVAQNSGLSSIASATSNMTGSPNIGISQPMGNVQGAVSMGQQVPGMSQGNPSGAQMVQGGVNMNQ
2) LSRSGVTSVPSNQSPVKVDAVSGIPVTGAPPTSMPSVNGSIPNRQPISGGNVVPAT
3) MINNGLGPSVVSSGTGTMIPTPGMSQQVQPGMQPLVNNNAAANMSLPQQTSGG
4) PVTTMVPGPGFPHNSSAPRATANNQGVPSLQTSSPSSMTQDIMTSNENAQDTKPTVSMLQPMRPVNSAQANMNILNKVS
376
234
511
296
509
289
563
374










Molecular Recognition Features






MoRF SequenceStartStop




NANANA