<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23467

Description Uncharacterized protein
SequenceMDQTQRVAAMATATASRAHQFHPARSPILDLFNLYLGRHTAHKNDDSIHEPPNKTQKRVLALRDIPPPNEQFLVDFEQLQNQFPDQDQLRSVTETIIISLVMQCSSHGPRAEFLLFAIRSLCSIGCINWDTLLPSLLASVSSAEFPVGHGSQSMPTVSASGLSQSGMLPPTTSIANSNNFQSSNPASPIPSIHPVGSPAQSAIEPLSCSALSPVKSSDVSSTGPQSKQVASIRNNDLSSLRQLCCKIILTGLEFNLKPAVYAEVFHHMLNWLVNWDQRQQGLDESDLPKSCGPDKALTAWLHSCLDVIWLLVDEGKCRVPFYELLRSSLQFIDNIPDDEALFTLILEIHRRRDMMAMNMQMLDQHLHCPTFGTQRILNQATLSISGEAVAQPRQPAITYLSVLGEPLHGEDIANSIQKGSLDWERALRCLRHAFRTTPSPDWWRRVLVLCPCFRPSQAPTPGAVFSTEMIIEATIDRIVELLRLTNSEINCWQDWLVFSDLFYFLMKNGCIDFVDFVEKLVSRLTEGDHPVLKTNHVTWLLAQIIRMELVTSTLNPDAKKIDTTRKILSVHRDERNSDPNGPQSTLLEFISSCQCLRIWSLNTTTREYVNNEQLQKGKQIDEWWKQVSKGDRMLDYMNMDDRSIGMFWVLSYTMAQPTCETVMNWLASAGIGELPPQTMGQTERLVATREVTPLPMSLLSGLSLNLCVKLSMLMEEALFVGQVIPSIAIVETYTRLLLVSPHSLFRSHFNHLVQKNSSLLSKSGVTLLLLEILNYRLLPLYRYHGKNKVLMFDVTKIMSALRGKRGDHRIFRLAENLCLNLIFSLRDFFFVRREGKGPSEFTETLNRAAVVTLAILIKTRGVADADHLHYLQSMLEQTLATSHHTWSEKTLRFFPPALREALSGRMDNRSQEIKSWQQTESTVLIQCTQLLSPSADPSYVMTYINHSFPQHRRYLCAGALTLMHGQAENINTGNLGRVLKEFSPEEVTANIYTMVDVLLHHMQVELQQGHSLQDLLSKACATIAFFVWTHELLPLDILLLALIDRDDDPHALRVVISLLDRQELQQRVKLFCITHGPHEHWLYTGVYKRVEVQKALGNHLSGKDRFPVFFDDIAARLLPVIPFIIYRLIENDAMDPADRILCMYSTLLAYHPFRFTFVRDILAYFYGHLPPKLIVRILNVLDISKIPFSESFPQQLTSPNPAVCPPLDYFATLLLGLVNNVIPPLHNNSKSGSMVDATKHNKPPAMSQSGTANSSEGQKAFHQIQDPGTYTQLVLETAVLEILSLPVSASQIVQSLVQIIVNIQPTLIQSNGGLQSGSTGQGSVLPTSPSGGSSDSLGASRSTPSNPGINTSNFASRSGYTCQQLSCLLIQACGLLLAQLPSDFHFQLYLETTRVIKENWWLTDWKRSLGEIDSAVGYALLDPTWAAQDNTSTAIGNIVALLHSFFSNLPQEWLEGAHVIIKQLQPIKSVAMLRIAFRIIGPLLPKLANAHSLFIKTLSLLLSILVDVFGKNSQPPAAVEASEVADLIDFLHHAVHYEGQGGPVQASSKPRPDVLALIGRASENLRPDIQHLLSHLKPDVNSSVYAASHPKLVQNPT
Length1597
PositionTail
OrganismArachis hypogaea (Peanut)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> dalbergioids sensu lato> Dalbergieae> Pterocarpus clade> Arachis.
Aromaticity0.07
Grand average of hydropathy-0.058
Instability index46.22
Isoelectric point6.47
Molecular weight178484.22
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP23467
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      38.82|      12|      15|    1329|    1342|       1
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 1329- 1342 (17.25/15.40)	PsgGSSDSLGASRS
 1347- 1358 (21.57/11.27)	P..GINTSNFASRS
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      56.30|      15|      15|    1192|    1206|       2
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 1192- 1206 (30.45/15.20)	FPQQLTSPNPAVCPP
 1210- 1224 (25.86/11.87)	FATLLLGLVNNVIPP
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      54.47|      15|      15|     634|     648|       3
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  634-  648 (29.89/19.31)	LDY.MNMDDRSIGMFW
  650-  665 (24.58/14.56)	LSYtMAQPTCETVMNW
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     347.52|     114|     180|     309|     446|       4
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  309-  446 (168.89/148.44)	WLLVDEgkcrvPFYELLRSS.LQFIDNIpddEALFTlileihrrRdMMAMNMQMLDQHlHCPTFGTQRI...LNQATLSISGEAVAQPRQpaitYLSVLGEPLHGEdiANSIQKGSLDWERALRCLR.HAFRTTPSP..............DWWRRV
  495-  627 (178.63/102.87)	WLVFSD.....LFYFLMKNGcIDFVDFV...EKLVS........R.LTEGDHPVLKTN.HVTWLLAQIIrmeLVTSTLNPDAKKIDTTRK....ILSVHRDERNSD..PNGPQSTLLEFISSCQCLRiWSLNTTTREyvnneqlqkgkqidEWWKQV
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      55.99|      16|      16|     192|     207|       5
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  192-  207 (29.25/16.74)	IHPVGSPAQSAIEPLS
  211-  226 (26.74/14.61)	LSPVKSSDVSSTGPQS
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     156.60|      46|    1127|     235|     281|       6
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  235-  281 (79.64/48.31)	NDLSSLRQLCCKIILTGLEFNLKPAVYAEVFHHMLN..WLVNWdQRQQG
 1363- 1410 (76.95/42.47)	QQLSCLLIQACGLLLAQLPSDFHFQLYLETTRVIKEnwWLTDW.KRSLG
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     109.78|      36|     169|     752|     868|       7
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  702-  739 (52.09/99.58)	LSLNLCVKLSMLMEEALFV...GQvIPSiAIVETYTRLLLV
  813-  851 (57.69/40.42)	LAENLCLNLIFSLRDFFFVrreGK.GPS.EFTETLNRAAVV
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      77.18|      24|     140|     869|     908|       9
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  882-  908 (39.13/24.27)	SHHTWSEKTLrffP.PALREALSGRMDN
 1024- 1048 (38.05/21.94)	AFFVWTHELL...PlDILLLALIDRDDD
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      85.74|      28|    1128|     153|     182|      10
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  153-  182 (42.77/36.21)	SMPtVSASGLSQSGM.....LPPTTsIANSNNFQS
 1284- 1316 (42.97/26.32)	SLP.VSASQIVQSLVqiivnIQPTL.IQSNGGLQS
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP23467 with Med23 domain of Kingdom Viridiplantae
Unable to open file!