<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23459

Description Uncharacterized protein
SequenceMTINQNQKRLIIVVDGNAMLVQYWPTIISEYLEKIVRNFCDNNQEQENNTVHEVGLVIYTANKSKNTHGSDHIKFLDWTKDMETFLGTLPFFELTGDGSDKLLMTQGLIEAIMMFIKDPKHNDQKKHCVLVALCEPNPTKTLITLPVIEDGQFLGSIETINGDIFDVMQIFAMLNISFSVITPTVHPIFRAIFNKMVHAMLIITITVKANNVDETEIYVLGGRNGEISVLLSKNFVEAHSILQGSTSKNITNFIIQEPITVAAITHVIPANNVSTTDLPVSKCQSSAAIATMVTGEQSLDAASTVRLDHHESQVDVPNNATPTPQIERHDEEDYFSSSFFIDDMIDELIKNNNDDDDEAEGIDGILSPTNDIPNSSVPLAVFSFEDLLNPNQETISCSSSKTKVSGKDFEEVDEHESGQALRSTTTTNDEQHKNKSKDKAIMTDDSLTQVAVSSMDVPSINIAPSPMMMSVGSSSRMGVPNPVLNSGISSSSNPAHHVLESSAVAETSQAEVHDTSGGMLIPGIEAMFGINKNHSFTHHHNQYLSSSSSSPYYSLFPNSSSLGSSRTMHQLEQYPSSSSAIAPPITQMGHTSLLQFQEPYPSSSSAAALNPDYYFLGAANNNNATIMGGNYSSPSMLFPFEPSPSLASEYGGEGPHSIGYFTQLLRKQQQHATQAYYNNQHRRHMHAGPTTYHLPYSSSKDFNQYVIFTWEVTSIATFLYTFTFFFIQTTDFY
Length733
PositionUnknown
OrganismArachis hypogaea (Peanut)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> dalbergioids sensu lato> Dalbergieae> Pterocarpus clade> Arachis.
Aromaticity0.08
Grand average of hydropathy-0.278
Instability index46.03
Isoelectric point4.95
Molecular weight80906.48
Publications









Function






Annotated function


GO - Cellular Component
integral component of membrane	GO:0016021	IEA:UniProtKB-KW

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP23459
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             7|     249.72|      29|      55|     535|     563|       1
---------------------------------------------------------------------------
  446-  472 (32.13/14.01)	SL................T....QVAV...SSMDVPSINIAP..SPmmMSVG
  475-  505 (34.15/15.38)	SR................MGVPNPVLNsgiSSSSNPAHHVL...ES..SAVA
  535-  563 (52.34/27.63)	SF................THHHNQYLS...SSSSSPYYSLFP..NS..SSLG
  570-  589 (33.25/14.77)	QL....................EQYPS...SSS.....AIAP..PI..TQMG
  592-  617 (40.45/19.62)	SL................LQFQEPYPS...SSSAA...ALNP..DY..YFLG
  623-  647 (32.02/13.94)	NA................TIMGGNY........SSPSM.LFPfePS..PSLA
  657-  699 (25.38/ 9.46)	SIgyftqllrkqqqhatqAYYNNQHRR...HMHAGPTTYHLP..YS..SS..
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      85.43|      22|      22|     365|     386|       2
---------------------------------------------------------------------------
  316-  354 (24.76/13.18)	VPNNATPTPQIERHDeedyfsssffiddmideLIKNNND
  355-  371 (24.87/13.27)	DDDEA.....EGIDG.................ILSPTND
  372-  393 (35.80/22.44)	IPNSSVPLAVFSFED.................LLNPNQE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     154.61|      45|     143|      48|     102|       3
---------------------------------------------------------------------------
   48-   93 (75.19/44.74)	NNTVHEVGLVIYTANKSKNTHGSDhIKFLDWTKDMETFLGTLPFFE
  194-  237 (68.03/34.97)	NKMVHAM.LIITITVKANNVDETE.IYVLGGRNGEISVLLSKNFVE
  258-  274 (11.39/ 6.19)	PITVAAITHVIPANNVS.............................
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP23459 with Med25 domain of Kingdom Viridiplantae
Unable to open file!