<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23455

Description Uncharacterized protein
SequenceMVRISFYVHVLPLICRYHGKSGEILATALYGHCEGGGYTFSRQATRADASTVWKEFTSSDGRKYYYNKVTQQSTWSIPEELKLARELALKAANQGMQLETSDTSNTAVSSAAPSTVTNTASSNTPLTSNGLASSPASVTPIASSTGPQQLVSGLSSTTGTELSTVVTASTAVAGPANPLDTTTPSSVENQASQDFAASTGGASVQDIEETKKGVPVAGKANVTLPEEKANDKETFAYANKMEAKIAFKALLESANVQSDWTWEQAMREIINDKRYNALKTLGERKQAFNEYLGQRKKLEAEERRMKQKKAREEFTKMLEECKELTSSMRWSKAINMFENDERFNAVDKMRDREDLFESYMVELERKEKENAAEEHRRNLAEYRKFLESCDYVKVHSPWRKVQDRLEDDDRYLRLEKIDRLLVFQDYIRELEKEEEEQKRVQKERVRRGERKNRDAFRKLLEEHVAAGILNAKTQWREYCLKVRDLPQYQAVASNTSGSTPKDLFEDVVEDLENQYHEDKTLIKDIIKSGKITVVSTSVFEEFKAAILEEASCETISEINLKLIFEDLLERAKEKEEKEAKKRQRLADDLTNLLYTFKDITTSSTWEDCKPLVEETQEYRSMGDENYSREVFEEYITYLKEKAKEKERKREEEKARKEKEREEKEKRKEKEKEKKEKDREREKEKSKDRHKKDDTDSENQDIESHGFKEEKKKDKDKERKHRKRRHSSVEDVDSERDEKEESKKSRKHGSDRKKSRKHANSPESDNETRHRRHKREHRDGSRKTGGHEELEDGELGDDAEI
Length800
PositionUnknown
OrganismArachis hypogaea (Peanut)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> dalbergioids sensu lato> Dalbergieae> Pterocarpus clade> Arachis.
Aromaticity0.07
Grand average of hydropathy-1.173
Instability index44.17
Isoelectric point6.17
Molecular weight92611.90
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process
mRNA cis splicing, via spliceosome	GO:0045292	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP23455
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     195.02|      34|      35|     664|     697|       1
---------------------------------------------------------------------------
  639-  666 (35.69/14.01)	KEKA...KEKERKR.EEEKA..RKEK.E...RE..ekEKR
  667-  704 (50.87/23.48)	KEKEKEKKEKDRER.EKEKSKDRHKK.DDTDSEnqdiESH
  705-  735 (41.33/17.53)	GFKEEKKKDKDKER..KHR.KRRHSSvEDVDSE......R
  736-  770 (42.83/18.46)	DEKEESKKSRKHGS.DRKKSRKHANS.PESDNE...tRHR
  771-  799 (24.31/ 6.92)	RHK.REHRDGSRKTgGHEELEDGELG.DDAE.........
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             7|     466.92|      66|      66|     236|     301|       2
---------------------------------------------------------------------------
  195-  233 (34.88/18.09)	............F.AAST.G...GA...S.VQ..D...IEETKKGVPVAGKANV....TLPE.EK.......ANDK....E
  236-  301 (95.64/64.52)	AYANKMEAKIA.F.KALL.E...SA...N.VQ..SDWTWEQAMREIINDKRYNAL..KTLGE.RKQAFNEYLGQRKKLEAE
  304-  369 (86.03/57.18)	RMKQK.KAREE.FtKMLE.E...CK...E.LT..SSMRWSKAINMFENDERFNAV..DKMRD.REDLFESYMVELERKEKE
  370-  436 (79.57/52.24)	NAAEEHRRNLAeY.RKFL.E...SC...DyVK..VHSPWRKVQDRLEDDDRYLRL..EKI.D.RLLVFQDYIRELEKEEEE
  446-  513 (56.87/34.90)	RRGER.KNRDA.F.RKLL.EehvAAgilN.AK..TQWR.EYCLK.VRDLPQYQAVasNTSGStPKDLFEDVVEDLEN....
  517-  577 (51.95/31.13)	......EDKTL.I.KDII.K...SG...K.ITvvSTSVFEEFKAAILEEASCETI..SEI.N.LKLIFEDLLERAKEKEEK
  578-  635 (61.98/38.80)	EAKKRQRLADD.L.TNLLyT...FK...D.IT..TSSTWEDCKPLVEETQEYRSM..GDENY.SREVFEEYI.........
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|      98.10|      21|      22|     113|     133|       3
---------------------------------------------------------------------------
  103-  125 (25.89/17.77)	.TSNTA.VS..saaPSTVTNTASSNTP
  126-  147 (32.49/24.28)	LTSNGL.AS....sPASVTPIASSTGP
  150-  173 (21.47/13.41)	LVS.GL.SSttgteLSTVV.TASTAVA
  174-  194 (18.25/10.23)	GPANPLdTT....tPSSVENQASQD..
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP23455 with Med35 domain of Kingdom Viridiplantae
Unable to open file!