<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23454

Description Uncharacterized protein
SequenceMLDYLQLIHPQTRRERKRVKEDPNSANRTRRFSLAVPAILLFRPVIQAQQGQPFAPMASQQFGLAGHAIPSSNVAMPVGQSQQLQYSQPMQQLPPRHIQPGQPAPSSQVIPMQYIQTNRPPTSVPPHSQPTVPHLSSHMPSLAVSAATSHSSYTFQPPYSQQQDNVNAMAQYQPSGQMHAPPAGQPWVSSVSQSAATVTPVQQAGVQSSGTPSTDSATSAPNQQSASDWQEHTAADGRRYYYNKRTRQSSWEKPLELMSPIERADASTVWKEFTSSDGRKYYYNKVTQQSTWSIPEELKLARELALKAANQGMQLETSDTSNTAVSSAAPSTVTNTASSNTPLTSNGLASSPASVTPIASSTGPQQLVSGLSSTTGTELSTVVTASTAVAGPANPLDTTTPSSVENQASQDFAASTGGASVQDIEETKKGVPVAGKANVTLPEEKANDKETFAYANKMEAKIAFKALLESANVQSDWTWEQAMREIINDKRYNALKTLGERKQAFNEYLGQRKKLEAEERRMKQKKAREEFTKMLEECKELTSSMRWSKAINMFENDERFNAVDKMRDREDLFESYMVELERKEKENAAEEHRRNLAEYRKFLESCDYVKVHSPWRKVQDRLEDDDRYLRLEKIDRLLVFQDYIRELEKEEEEQKRVQKERVRRGERKNRDAFRKLLEEHVAAGILNAKTQWREYCLKVRDLPQYQAVASNTSGSTPKDLFEDVVEDLENQYHEDKTLIKDIIKSGKITVVSTSVFEEFKAAILEEASCETISEINLKLIFEDLLERAKEKEEKEAKKRQRLADDLTNLLYTFKDITTSSTWEDCKPLVEETQEYRSMGDENYSREVFEEYITYLKEKAKEKERKREEEKARKEKEREEKEKRKEKEKEKKEKDREREKEKSKDRHKKDDTDSENQDIESHGFKEEKKKDKDKERKHRKRRHSSVEDVDSERDEKEESKKSRKHGSDRKKSRKHANSPESDNETRHRRHKREHRDGSRKTGGHEELEDGELGDDAEI
Length1017
PositionUnknown
OrganismArachis hypogaea (Peanut)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> dalbergioids sensu lato> Dalbergieae> Pterocarpus clade> Arachis.
Aromaticity0.06
Grand average of hydropathy-1.118
Instability index55.29
Isoelectric point6.61
Molecular weight116413.97
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process
mRNA cis splicing, via spliceosome	GO:0045292	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP23454
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     163.99|      29|      29|     856|     884|       1
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  856-  881 (35.40/12.98)	..........KEKAKEKERKRE.EEKA..RK......EKEREEKE
  882-  914 (35.00/12.75)	KRK....ekeKEK.KEKDRERE.KEKSkdRH......KKDDTDSE
  915-  956 (32.51/11.38)	NQDieshgfkEEKKKDKDKERK.HRKR..RHssvedvDSERDEKE
  957-  981 (35.93/13.27)	ESK.......KSRKHGSDRK.....KS..RK......HANSPESD
  983- 1007 (25.15/ 7.32)	............ETRHRRHKREhRDGS..RK......TGGHEELE
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     138.88|      37|      38|     221|     257|       2
---------------------------------------------------------------------------
  221-  257 (74.44/52.38)	P.NQQSASD.WQEHTAADGRRYYYNKRTRQSSWEKPLEL
  260-  298 (64.44/44.18)	PiERADASTvWKEFTSSDGRKYYYNKVTQQSTWSIPEEL
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     149.77|      25|      25|     326|     350|       3
---------------------------------------------------------------------------
  190-  213 (36.45/23.14)	SVSQSAATVTP..VQQAGVQS..SGT....PS
  332-  353 (37.49/24.04)	TVTNTASSNTP..LTSNGLAS....S....PA
  354-  380 (26.86/14.91)	SVTPIASSTGPqqLVS.GLSStTGTE....LS
  381-  402 (23.14/11.71)	TVV.TASTAVA..GPANPL.......dtttPS
  403-  420 (25.84/14.03)	SVENQASQD.........FAA.STGG....AS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     131.81|      23|      25|      81|     103|       4
---------------------------------------------------------------------------
   49-   77 (21.02/ 8.68)	.Q..Q.......GQPFA...PMasQQF..GlAGHAIPSSnvamP
   81-  103 (50.24/31.51)	SQ..Q.......LQYSQ...PM..QQL..P.PRHIQPGQ....P
  107-  133 (34.67/19.34)	SQviP.......MQYIQtnrPP..TSV..P.P.HSQPTV....P
  160-  186 (25.89/12.49)	SQ..QqdnvnamAQY.Q...PS..GQMhaP.PA....GQ....P
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             6|     402.21|      63|      65|     457|     519|       5
---------------------------------------------------------------------------
  457-  510 (73.25/42.91)	.....................KMEAKIA...F.KALLE...S.A...N.VQ..SDWTWEQAMREIINDKRYNAL..KTLGE..RKQAFNEYLG
  511-  578 (77.87/46.10)	QRKKLEAEE...........rRMKQKKAreeFtKMLEE...C.K...E.LT..SSMRWSKAINMFENDERFNAV..DKMRD..REDLFESYMV
  579-  645 (75.46/44.44)	ELERKEKEN.........aaeEHRRNLA..eY.RKFLE...S.C...DyVK..VHSPWRKVQDRLEDDDRYLRL..EKI.D..RLLVFQDYIR
  646-  726 (58.47/32.69)	ELEKEEEEQkrvqkervrrgeR.KNRDA...F.RKLLEehvA.AgilN.AK..TQWR.EYCLK.VRDLPQYQAVasNTSGS.tPKDLFEDVVE
  727-  786 (46.12/24.15)	.....DLEN...........qYHEDKTL...I.KDIIK...S.G...K.ITvvSTSVFEEFKAAILEEA...SC..ETISEinLKLIFEDLLE
  787-  852 (71.05/41.39)	RAKEKEEKE.........akkRQRLADD...L.TNLLY...TfK...D.IT..TSSTWEDCKPLVEETQEYRSM..GDENY..SREVFEEYI.
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP23454 with Med35 domain of Kingdom Viridiplantae
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