<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23453

Description Uncharacterized protein
SequenceMLDYLQLIHPQTRRERKRVKEDPNSANRTRRFSLAVPAILLVTQSNQSDYTVKMANNSQPPSMQFRPVIQAQQGQPFAPMASQQFGLAGHAIPSSNVAMPVGQSQQLQYSQPMQQLPPRHIQPGQPAPSSQVIPMQYIQTNRPPTSVPPHSQPTVPHLSSHMPSLAVSAATSHSSYTFQPPYSQQQDNVNAMAQYQPSGQMHAPPAGQPWVSSVSQSAATVTPVQQAGVQSSGTPSTDSATSAPNQQSASDWQEHTAADGRRYYYNKRTRQSSWEKPLELMSPIERADASTVWKEFTSSDGRKYYYNKVTQQSTWSIPEELKLARELALKAANQGMQLETSDTSNTAVSSAAPSTVTNTASSNTPLTSNGLASSPASVTPIASSTGPQQLVSGLSSTTGTELSTVVTASTAVAGPANPLDTTTPSSVENQASQDFAASTGGASVQDIEETKKGVPVAGKANVTLPEEKANDKETFAYANKMEAKIAFKALLESANVQSDWTWEQAMREIINDKRYNALKTLGERKQAFNEYLGQRKKLEAEERRMKQKKAREEFTKMLEECKELTSSMRWSKAINMFENDERFNAVDKMRDREDLFESYMVELERKEKENAAEEHRRNLAEYRKFLESCDYVKVHSPWRKVQDRLEDDDRYLRLEKIDRLLVFQDYIRELEKEEEEQKRVQKERVRRGERKNRDAFRKLLEEHVAAGILNAKTQWREYCLKVRDLPQYQAVASNTSGSTPKDLFEDVVEDLENQYHEDKTLIKDIIKSGKITVVSTSVFEEFKAAILEEASCETISEINLKLIFEDLLERAKEKEEKEAKKRQRLADDLTNLLYTFKDITTSSTWEDCKPLVEETQEYRSMGDENYSREVFEEYITYLKEKAKEKERKREEEKARKEKEREEKEKRKEKEKEKKEKDREREKEKSKDRHKKDDTDSENQDIESHGFKEEKKKDKDKERKHRKRRHSSVEDVDSERDEKEESKKSRKHGSDRKKSRKHANSPESDNETRHRRHKREHRDGSRKTGGHEELEDGELGDDAEI
Length1040
PositionUnknown
OrganismArachis hypogaea (Peanut)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> dalbergioids sensu lato> Dalbergieae> Pterocarpus clade> Arachis.
Aromaticity0.06
Grand average of hydropathy-1.119
Instability index55.83
Isoelectric point6.61
Molecular weight118951.70
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process
mRNA cis splicing, via spliceosome	GO:0045292	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP23453
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     206.14|      37|      38|     901|     937|       1
---------------------------------------------------------------------------
  615-  669 (33.40/12.38)	HRRnlaEYRKFLESCdyvkvhspwRKVQDRLEDDDRYLRLEKI.DrllvfqDYIRE
  904-  937 (51.24/22.78)	......EKRKEKEKE.........KKEKDREREKEKSKDRHKK.D......DTDSE
  939-  974 (48.50/21.18)	QDI...ESHGFKEEK.........KKDKDKER.KHR.KRRHSSvE......DVDSE
  975- 1006 (35.64/13.68)	........RDEKEES.........KKSRKHGSDRKKSRKHANS.P......ESDNE
 1009- 1039 (37.35/14.68)	HRR...HKREHRDGS.........RKTGG....HEELEDGELG.D......DAE..
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     377.04|      63|      65|     480|     542|       2
---------------------------------------------------------------------------
  480-  542 (92.43/59.56)	KMEAKI...A...F.KALLE...S..........ANVQ..SDWT.W.EQAMREIINDKRYNAL.KTLGE...RKQAFNEYLGQRKKL..EAEE
  544-  610 (87.87/56.24)	RMKQKK...AreeFtKMLEE...C..........KELT..SSMR.W.SKAINMFENDERFNAV.DKMRD...REDLFESYMVELERK..EKEN
  686-  753 (60.30/36.13)	RRGERKnrdA...F.RKLLEehvA..........AGIL..NAKTqWrEYCLK.VRDLPQYQAV.ASNTSgstPKDLFEDVVEDL.......EN
  754-  818 (68.18/41.88)	QYHEDK...T..lI.KDIIK...S..........GKITvvSTSV.F.EEFKAAILEEASCETI.SEI.N...LKLIFEDLLERAKEK..EEKE
  820-  887 (68.25/41.93)	KKRQRL...A..............ddltnllytfKDIT..TSST.W.EDCKPLVEETQEYRSMgDENYS...RE.VFEEYITYLKEKakEKER
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     140.24|      37|      39|     244|     280|       3
---------------------------------------------------------------------------
  244-  280 (75.19/47.47)	P.NQQSASD.WQEHTAADGRRYYYNKRTRQSSWEKPLEL
  283-  321 (65.06/40.05)	PiERADASTvWKEFTSSDGRKYYYNKVTQQSTWSIPEEL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             6|     178.90|      23|      25|     104|     126|       4
---------------------------------------------------------------------------
   45-   70 (24.20/12.90)	SN..Q.......SDYtvkmannSQ...P........P.SMQFR.PVI....Q
   71-  100 (22.99/11.83)	AQ..Q.......GQP.......FA...PMasQQF..GlAGHAI.PSSnvamP
  104-  126 (49.63/35.31)	SQ..Q.......LQY.......SQ...PM..QQL..P.PRHIQ.PGQ....P
  130-  156 (32.33/20.06)	SQviP.......MQY.......IQtnrPP..TSV..P.P.HSQ.PTV....P
  183-  209 (25.62/14.15)	SQ..QqdnvnamAQY........Q...PS..GQMhaP.P.....AGQ....P
  215-  235 (24.13/12.84)	SQ..S.......AAT.......VT...PV..QQ......AGVQsSGT....P
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     182.78|      40|      40|     396|     435|       5
---------------------------------------------------------------------------
  335-  364 (41.39/26.32)	...GMQLETS..DTSNTAVSSAA........PSTVTNTASSNT
  365-  394 (38.36/23.78)	PLTSNGL.......ASSPAS..VTPIASSTgP....QQLVSGL
  396-  435 (66.85/47.66)	STTGTELSTV..VTASTAVAGPANPLDTTT.PSSVENQASQDF
  438-  471 (36.18/21.96)	STGGASVQDIeeTKKGVPVAGKAN...VTL.PEEKAND.....
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      44.92|      13|     213|     672|     684|       6
---------------------------------------------------------------------------
  672-  684 (22.65/10.60)	KEEEEQKRVQKER
  888-  900 (22.27/10.31)	KREEEKARKEKER
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP23453 with Med35 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) AIPSSNVAMPVGQSQQLQYSQPMQQLPPRHIQPGQPAPSSQVIPMQYIQTNRPPTSVPPHSQPTVPHLSSHMPSLAVSAATSHSSYTFQPPYSQQQDNVNAMAQYQPSGQMHAPPAGQPWVSSVSQSAATVTPVQQAGVQSSGTPSTDSATSAPNQQSASDWQEHTAADGRRYYYNKRT
2) DYTVKMANNSQPPSMQFRPVIQAQQGQPFAPMASQQFG
3) ELALKAANQGMQLETSDTSNTAVSSAAPSTVTNTASSNTPLTSNGLASSPASVTPIASSTGPQQLVSGLSSTT
4) KERKREEEKARKEKEREEKEKRKEKEKEKKEKDREREKEKSKDRHKKDDTDSENQDIESHGFKEEKKKDKDKERKHRKRRHSSVEDVDSERDEKEESKKSRKHGSDRKKSRKHANSPESDNETRHRRHKREHRDGSRKTGGHEELEDGELGDDAEI
5) LSTVVTASTAVAGPANPLDTTTPSSVENQASQDFAASTGGASVQDIEETKKGVPVAGKANVTLPEEKANDKETF
91
49
326
885
402
269
86
398
1040
475










Molecular Recognition Features






MoRF SequenceStartStop




1) HEELEDGELGDDAEI
2) RHRRHKREHR
1026
1008
1040
1017