<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23443

Description Uncharacterized protein
SequenceMMSKTKAMAFLLLFALEFMIGMVVAADESANNVGTVIGIDLGTTYSCVGVYKKDHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAPLNPKRTIFDVKRLIGRKFDDPEVQRDVRYLPYKIVNKDGKPYIQVQVKGEDKVFSPEEISAMVLTKMKETAESFLGKKIKSAVITVPAYFNDAQRQATKDAGTIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVYDLGGGTFDVSILTIDNGVFEVLATSGDTHLGGEDFDHRLMDYFIKLIKKKYNKDISNDNRAIGKLRRECERAKRALSSQHQVRVEIESLFDGNDFSEPLTRARFEELNMDLFKKTMGPVKRAIEDAGLKKTDIDDIVLVGGSTRIPKVQQLLMDFFEGKELNKGINPDEAVAYGAAIQGGILSGEGGEETKDLLLLDVAPLSLGLETVGGVMTKIIPRNTVIPTKKSQIFTTYQDQQTTVSIKVYEGERALTKDCRELGKFDLSGIPPAPRGVPQIEVTFEVDANGILHVKAEDKAGKKSESITITNDKGRLSQEEIERMVKEAEELAEEDKKVRERIDARNKLETYIFNMRSTINDKDKLSDKIDSDDKEKIEGTLKDVLEWLDDNQNAEKQEFEEKLKEVEAVCNPVIKEVYEKSGGSSSSGFDDEESADEL
Length661
PositionUnknown
OrganismArachis hypogaea (Peanut)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> dalbergioids sensu lato> Dalbergieae> Pterocarpus clade> Arachis.
Aromaticity0.06
Grand average of hydropathy-0.436
Instability index32.21
Isoelectric point5.07
Molecular weight73381.52
Publications









Function






Annotated function


GO - Cellular Component
endoplasmic reticulum	GO:0005783	IEA:UniProtKB-KW

GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP23443
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      54.13|      17|      21|      65|      82|       1
---------------------------------------------------------------------------
   65-   82 (27.92/22.60)	NR..ITPSWVAFtDSERLIG
   87-  105 (26.21/15.92)	NQapLNPKRTIF.DVKRLIG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      87.12|      21|      21|     587|     607|       2
---------------------------------------------------------------------------
  560-  585 (24.08/13.16)	KVRERIDARNKLetyifNMRSTINDK
  587-  607 (31.74/19.68)	KLSDKIDSDDKE.....KIEGTLKDV
  609-  629 (31.30/19.31)	EWLDDNQNAEKQ.....EFEEKLKEV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     149.41|      51|     393|     107|     162|       3
---------------------------------------------------------------------------
  107-  162 (80.56/71.31)	KFDD...PEVQRDVRYLPYKI.VNKDGkpyiQVQVKGEDKV...............FSPEEISAMVlTKMKETAE
  487-  556 (68.85/46.46)	KFDLsgiPPAPRGVPQIEVTFeVDANG....ILHVKAEDKAgkksesititndkgrLSQEEIERMV.KEAEELAE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     122.64|      40|     186|     196|     241|       5
---------------------------------------------------------------------------
  196-  240 (56.27/44.71)	GLNVARIINePTaAAIAYGLDKKGGeknILVYDLGGGTFDVSILT
  385-  424 (66.37/36.67)	GKELNKGIN.PD.EAVAYGAAIQGG...ILSGEGGEETKDLLLLD
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP23443 with Med37 domain of Kingdom Viridiplantae
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