<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23442

Description Uncharacterized protein
SequenceMAVPAQTSATDQPSLWDAVLRHTELAQQRNSDPNLWASELAAMLRSSTVILPSVELAHHLVSHFFWKNHCPAAWKFLERAISLNIVPPLLLLALLSATVVPSRQLHPVAYRLYMELLKRNVFMLASHINSPNYEKIMTSIDEVLLLSQVYNRKDCEPGVVLVEFVFSIVWQLLEAVLDDEGLLDHASEDNPRWLRRSDDMNIGSPDCFTGKKTEQKGELQRENTAMAIEIVAEFLQNKITSRILSLVHQNMPSHWGFFIRQMHLLVSNSSVLRSSKHITPEALLLLMENIYKGISHQSKTTSKANAFMVAGSQIFFAGQSFGDSCSLQWLPIDLILEDALGGANVSALSAIKIVTGLVKVLHAVNGSTWHSAFLGLWIAALRLVQRERDSTEGPVPRLHTCMCMLLSIITLVVAHIIDEEESELIEEAECSPANQRKDKPTLGKCRGELIASLQLLGDYEFLLTPPQSFFSEANKAAAKAIMFLAGNSVGSEVLESISVNDLPTKCSGNLWHLIVEACIARNLLDTSAYSWPGYVNACSNQIPCSTSSQVAGWSSLMKGSQLTPELVDVLVVTPASSLAEIEKIYEIATNGSDEEKISAATILCGASLVRGWNVQEHTILFMTSLLSPLVPPTESHLISQAQFLNVLLIGISSLDCVHIFSLHGLVPLLAAGLMRICEVFGSCVPDVSQTLSTGEELSFHEVFSNAFTLLLRFWRFDVPSIEHVRRDSATPPLGSLFCPDSLLLVRNFLLASFGRSAKDQITRKRFSKYITFPTEPVFLDSFPKFNFWYQQHQECIVSIPSGLVPGGPVHQIVDVLLCTLFRKINSCDEPLACSNSGSSGSPGSALNEAIMKLKVPAWDILEAIPFVLDAALTACAHGRLSTRQLATGLKDLADFLPASLVTIASYLSAEVRRGIWKPGFMNGTDWPSPAANLSLVEQQIKKILATTGVDVPSLAVDGDFQATLPLPLAAFVSLTLTYKLDKDTGRFLSLIGPVMIALASSCPWPCMPIVASLWVQKVKRWSDHLVLSASRTVFHCNKDAVVQLLRSCFKSTLGLGSACLHNNGGVGALLGHGYGVGVNSKTSDGVSPIAPGTICLKVYQYIGDTRYLSEEIVSILMQTVRGIVSNQLLKGDGKKQKKIKYGTTHGHVSLARSKARVKHAALLAASLVWISGGIKLVQYFIKETIPKWFFSSSMLELDGEESSALVAMLRGYALAFFVMLSGAFAWGIDHSLLSRQRGKVMGLHFEFIASVLQKNIPLRCQDATWRAYVSGFLSLIVSCTPLWVSEIDVDILKRLSKGLIQMNEHELALRLLEKGGIGAMGAAAEMIVAFQHRF
Length1334
PositionTail
OrganismArachis hypogaea (Peanut)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> dalbergioids sensu lato> Dalbergieae> Pterocarpus clade> Arachis.
Aromaticity0.08
Grand average of hydropathy0.217
Instability index44.27
Isoelectric point6.63
Molecular weight146277.03
Publications









Function






Annotated function


GO - Cellular Component
integral component of membrane	GO:0016021	IEA:UniProtKB-KW
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP23442
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     143.50|      47|      58|    1207|    1254|       1
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 1207- 1254 (78.71/48.88)	AMLRGYALAFF.VMLSGAFAW..GIDHSLLSR.QRGKV.MGLHfEFIASVLQK
 1263- 1314 (64.79/35.44)	ATWRAYVSGFLsLIVSCTPLWvsEIDVDILKRlSKGLIqMNEH.ELALRLLEK
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     382.50|     128|     359|     476|     628|       2
---------------------------------------------------------------------------
  225-  369 (188.04/135.83)	AMAIEIVaeFLQ.NKITSRIL.SLVHQNMPSH.WGffiRQMHLLVS...NSSVLRSSKHITPEALLLLMENIYKGISHQSKTTSKanafMVAGSQI...FFAGQSFGDSCSLQwlPIDLILEDALGGANVSALSAIKIVTGlvkvLHAVNGstW
  476-  612 (194.46/208.93)	AAAKAIM..FLAgNSVGSEVLeSISVNDLPTKcSG...NLWHLIVEaciARNLLDTSAYSWPGYVNACSNQIPCSTSSQVAGWSS....LMKGSQLtpeLVDVLVVTPASSLA..EIEKIYEIATNGSDEEKISAATILCG....ASLVRG..W
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     553.37|     176|     849|       3|     185|       4
---------------------------------------------------------------------------
    3-  185 (285.54/173.67)	VPAQTSATDQPSLWDAVLrhTELAQQRNSDPNLWA..SELAAMLRSSTVILPSVELAHhlVSHFFWKNHCPAAWKFLERAISLNIVP...........................PLLLLALLSATVvpSRQLHPVAYRlYMELLKRNVFMLAS.......HINSPNYEKIMTSIDEVLLLSQVYNRKDC..EPGVVLVEFVFSIVWQLLEAVLDDEG....LLDH
  855- 1072 (267.83/144.96)	VPAWDILEAIPFVLDAAL..TACAHGRLSTRQLATglKDLADFLPASLVTIASYLSAE..VRRGIWKPGFMNGTDWPSPAANLSLVEqqikkilattgvdvpslavdgdfqatlPLPLAAFVSLTL..TYKLDKDTGR.FLSLIGPVMIALASscpwpcmPIVASLWVQKVKRWSDHLVLSASRTVFHCnkDAVVQLLRSCFKSTLGLGSACLHNNGgvgaLLGH
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP23442 with Med33 domain of Kingdom Viridiplantae
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