<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23425

Description Uncharacterized protein
SequenceMDQFSSGGNWTMIPTHNTNTPTHSQSQDPLYLHQQQQQQQQQQFLHQTFQQPQQPQFQQQQQLYQQQQQQQQQQQQQQQQLLLQQQQQQQQQQQQQQQLQQQQQQQQQQQQQQQNLHQSLASHYHLLHLVENLAEVIEHGTPDQQSDALITELSTHFEKCQQLLNSISDSISTKAMTVEGQNKKLEESEQLLNQRRDLIANYRNSVEELVKSEP
Length214
PositionMiddle
OrganismArachis hypogaea (Peanut)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> dalbergioids sensu lato> Dalbergieae> Pterocarpus clade> Arachis.
Aromaticity0.05
Grand average of hydropathy-1.439
Instability index92.51
Isoelectric point5.31
Molecular weight25404.25
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP23425
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      99.32|      28|      34|      47|      80|       1
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   25-   57 (49.70/ 7.94)	QSQDPLYLHQQQQQQQQQ....QflhQtfQQPQQPQF
   58-   92 (49.63/ 9.73)	QQQQQLYQQQQQQQQQQQqqqqQlllQ..QQQQQQQQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      74.88|      24|      25|     146|     169|       3
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  146-  169 (40.18/23.61)	SDALITE.LSTHFEKCQQLLNSISD
  173-  197 (34.69/19.43)	TKAMTVEgQNKKLEESEQLLNQRRD
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP23425 with Med9 domain of Kingdom Viridiplantae
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