<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23422

Description Uncharacterized protein
SequenceMKTQCQQVGKSSTSTQIRITRAGQNISEVEKNSKTCTNFWISDQYTSILVLKQYNCCSRSSVDSTAQTGQPSAGDWQEEVYQKIKIMKENYLPELTEMYQKIASKLQQHDLPNQPKSDQLEKLKVFKLMLERIIAFLQVSKGSILPNYKDKMSSYEKQIINFINTNRPRKAPGQLPPTHIHSMSQSQSQVTQAQSHENQMNSQLQTTNIQGSVPMTQQNNMTSMQMSGVSPAQQNMINSMQPGTNLDSGQGNAINSLQQVPVSSLQQNPVSAPQQSNPGVFQQNLNSNQRSAFPHQQLKQGNSFPASSPQLLQAASPQIPQHSSPQVDQQNHPPSLTKAGTPLQSANSPFVGPTPSPPLAPSPMPGDSEKPISGLSTMSNAVNVGHQQTSSTVAPAQSLAIGTPGISASPLLAEFSGLDGPHGNALAPTSGKSSVTDQPLERLIRVMKSMSSKALTAAVSDIGSVVSMNDRIAGSAPGNGSRAAVGEDLVAMTNCRLQARNFITQDGANGTRRMKRYTNATPLNVASSAGSMNDSIKQLTLEASDLESTATSSIKKPRIEANHALLEEIREINQRLIDTVVDISEEEVDPTSAAAAADGAEGTVVKCSFVAVALSPSLKSQYASAQMSPIQPLRLLVPTNYPNCSPLLLDKFPVESSKENEDLSLKAKARFSISLRSLSQPMSLGEIARTWDICARTVISEHAQQSGGGSFSSKYGTWEDCLTSA
Length725
PositionTail
OrganismArachis hypogaea (Peanut)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> dalbergioids sensu lato> Dalbergieae> Pterocarpus clade> Arachis.
Aromaticity0.04
Grand average of hydropathy-0.488
Instability index53.50
Isoelectric point8.42
Molecular weight78034.80
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
chromatin DNA binding	GO:0031490	IEA:InterPro
transcription coactivator activity	GO:0003713	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP23422
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|      89.70|      15|      15|     307|     321|       1
---------------------------------------------------------------------------
  271-  282 (21.09/ 8.22)	SAP....QQSNPGVFQ
  307-  321 (28.08/13.79)	SSPQL.LQAASPQIPQ
  323-  338 (22.08/ 9.01)	SSPQVdQQNHPPSLTK
  355-  365 (18.45/ 6.12)	PSPPL...APSP.MP.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      53.28|      13|      15|     213|     225|       2
---------------------------------------------------------------------------
  213-  225 (26.77/12.97)	VPMTQQNNMTSMQ
  229-  241 (26.50/12.77)	VSPAQQNMINSMQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      54.56|      16|      16|      79|      94|       3
---------------------------------------------------------------------------
   79-   94 (29.03/16.99)	EVYQKI.KIMKENYLPE
   97-  113 (25.53/14.22)	EMYQKIaSKLQQHDLPN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      50.48|      15|      16|     179|     194|       4
---------------------------------------------------------------------------
  179-  194 (22.84/16.70)	HIHSMSqSQSQVTQAQ
  196-  210 (27.64/15.53)	HENQMN.SQLQTTNIQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      44.02|      15|      16|     651|     665|       8
---------------------------------------------------------------------------
  651-  665 (24.28/13.73)	K..FPVESSKENEDLSL
  668-  684 (19.75/ 9.84)	KarFSISLRSLSQPMSL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      46.88|      15|      42|     245|     259|       9
---------------------------------------------------------------------------
  245-  259 (25.86/13.45)	NLDSGQGNAIN..SLQQ
  284-  300 (21.02/ 9.52)	NLNSNQRSAFPhqQLKQ
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP23422 with Med15 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) IINFINTNRPRKAPGQLPPTHIHSMSQSQSQVTQAQSHENQMNSQLQTTNIQGSVPMTQQNNMTSMQMSGVSPAQQNMINSMQPGTNLDSGQGNAINSLQQVPVSSLQQNPVSAPQQSNPGVFQQNLNSNQRSAFPHQQLKQGNSFPASSPQLLQAASPQIPQHSSPQVDQQNHPPSLTKAGTPLQSANSPFVGPTPSPPLAPSPMPGDSEKPISGLSTMSNAVNVGHQQTSSTVAPAQSLAI
159
401










Molecular Recognition Features






MoRF SequenceStartStop




NANANA