<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23420

Description Uncharacterized protein
SequenceMERIQDKADENSISEHSPSSVVALAIKGNKKSKFVVQWALNKFVPEGMIVFKLIHVHPGIKGVPTPMGNVIPISQVRTDVANAFRKEVEWQTNQKLLPFKRMCEQRKVHADIVVIESDDVAGAVAEEVAKGAITKLVVGASSRSIFTSKHKGISAKISVCTPRFCTVYATSKGKLSIRPSDIQVDDSIIDDTSGISFSSSSSSNYTSTTQTDTGSLASYAPSHSSSLTTQRFQALSSINQTLLKTSTGLIETNHSRGRSLDFGRENITSTSSRNSDIDYALNRSSSYKSVISDTESLNFDQNSAKEEPLAIEHPSPNRQENVNLELEKLRIELRQAQGLHAVAQSESIDASRKLNDLSKRRSEESMKLKEILAKEEMAKELARHEREKYEAAAREAEYLKECAEREAAERKEAELKAIRAAKDKEKLEDAITGSTPLYRKFAWDEIVSATSSFSEDLKIGMGAYGKVYKCSLYHTTVAVKVLHPNRGHNSKQFQQELEILSRTRHPNLLLLLGACPEHGCLVYEYMENGNLDDRLLRKNNATPIPWFERYRIAWEVASALSFLHSSKPKPIIHRDLKPANILLGRNLVSKIGDIGLSTMLQSDNLSTMYKDTEPVGTLCYIDPEYQRNGLISPKSDVYALGIVILQLLTAKPAIGITHVVETAIGAGKLTDILDPEAGSWPFQETLELAQLGLSCAELRRIDRPDLKDHVLPKLERLKEIADRTQESPSIVFVRSRPPNHFICPILQDVMDDPCVAADGYSYDRKAIEKWFQENDKSPMTNMALPHKHLIPNYTLLSAIMEWKSQ
Length805
PositionTail
OrganismArachis hypogaea (Peanut)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> dalbergioids sensu lato> Dalbergieae> Pterocarpus clade> Arachis.
Aromaticity0.06
Grand average of hydropathy-0.421
Instability index40.54
Isoelectric point7.09
Molecular weight89829.10
Publications









Function






Annotated function

Functions as an E3 ubiquitin ligase.



GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP23420
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     208.01|      69|     217|     498|     583|       1
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  498-  583 (104.88/98.52)	EILSRTRH.PNLLLLLGACPEH.GC.LVYEYMengnlDDRLLRKNNATpipwFERYRI.AWevasalsfLHSSKPKPII.....HRDLKPANILL
  719-  796 (103.13/62.35)	EIADRTQEsPSIVFVRSRPPNHfICpILQDVM.....DDPCVAADGYS....YDRKAIeKW........FQENDKSPMTnmalpHKHLIPNYTLL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     110.76|      38|      39|     141|     179|       2
---------------------------------------------------------------------------
  130-  171 (54.42/38.69)	KGaitKLVVGASSRSI...FTSKHKGISAKiSVCTPRFCTVYATS
  172-  212 (56.34/35.55)	KG...KLSIRPSDIQVddsIIDDTSGISFS.SSSSSNYTSTTQTD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     130.71|      35|      67|     295|     330|       3
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  259-  288 (30.69/16.75)	.SLDFGREN.......ITSTS.SRN..SDIDYALNRsssYK
  295-  330 (53.10/40.16)	ESLNFDQNSAKEEpLAIEHPSPNRQ..ENVNLELEK...LR
  364-  400 (46.92/29.65)	ESMKLKEILAKEE.MAKELARHEREkyEAAAREAEY...LK
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP23420 with Med32 domain of Kingdom Viridiplantae
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