<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23410

Description Uncharacterized protein
SequenceMNQVGGTKGPVVEVVEDEEPEAVAEAQEKNEAVELSGEQKQPPVENPMEEDPVTTTPATVFCIRLKQPKSHLLHKMSVPEVCRNFSAVSWCGKLNAIACASETCARIPSSTANPPFWIPIHIVIPERPTECAVFDVLADSPRDSVQFIEWSPTSCPRALLIANFHGRVTIWTQPSQGPANLVRDTSYWQLEHEWRQDIAVVTKWLSGVSLYRWLSSKSSGAANSKSIFEEKFLSQQSQTSARWPNFLCVCSVFSSGSVQLHWSQWPHCQNAAPARWFCTSKGLLGCGPSGIMDADAIITDSGAMHVAGVPIVNPSTVVVWEVMPGPGNGFQATPKTSINNCAPPLSPPNWSGFAPLAAYLFSWQDYLISEEKRGKKLTDQNIGDSIPLHCSPVSNFSAYVSPEAAAQSSAATTWGSGVTAVAFDPTRGGSVIAVVIIEGQYMSPYDPDEGPSVTGWRVQRWESSLQHVVLHPIFGNPTSSMGGQPPMQTVWQSKVDLSIPPTNDFKNHRTHAVGMKTNVQKVSESSFKGVTFDPFDLPSDVRTLARVVYAAHGGEIAIAFLRGGVHIFSGPNFAPVDNYQITVGSAIAAPAFSSTSCCLASVWHDTCKDQTVLKIIRVLPPAIPTSQVKANSSTWERAIAERFWWSLLVGVDWWDAVGCTQSAAEDGIVSLNSIIAVLDADFHSLPSAQHRQQYCPSLDRIKCRLLEGANAQEVRAMVLDMQARLLLDMLGKGIESALIDPSVLVPDPWQVSSDTLSRIDAQAVSVEPALMPSIQAYVDSVLDLASHFITRLRRYASFCRTLATHAVTAGTASNRNIVPSPAAQSSATPAPSQGAQNGTTSSSGTPQMQAWVQGAIAKISNPADGVSNPTPNPPITGPPSFMPISVNTGTFPGTPAVRLIGDCHFLHRLCQLLLFCFFFRRAQLPRYAGGAHRTADANAQKPQPNASAPGNVDEVAKPVSTVVKSDDGQTNRTGQVVPGAKGTEEPTSGRSRVGTGNAGQGYTFEEVKVLFLILMDLCRRTSGLQHPLPVSQVGSSNIQVRLHYIDGNYTVLPEVVEASLGPHMQNMPRPRGTDAAGLLLRELELHPPAEEWHRRNMFGGLSSDPNDVGPANKLVSSSPRDLSSLENCDVYHGAHAIWPRKRRMSEREAAFGLNSSVGLGGYLGIMGSRRDVVTALWKTGLEGVWYKCIRCLRQTCAFTSPGSTNPPSQNDREIWWISRWTHGCPICGGTWVRVV
Length1235
PositionTail
OrganismArachis hypogaea (Peanut)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> dalbergioids sensu lato> Dalbergieae> Pterocarpus clade> Arachis.
Aromaticity0.08
Grand average of hydropathy-0.175
Instability index46.66
Isoelectric point6.47
Molecular weight133798.04
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of transcription, DNA-templated	GO:0006355	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP23410
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     146.01|      48|     240|     535|     590|       1
---------------------------------------------------------------------------
  535-  590 (67.30/54.66)	FDLPS.dVRTLARvvYAAHGGEIAIAFLRGGVHifSGPNFAPVDNYQitvGSAIAAP
  782-  831 (78.71/41.39)	LDLAShfITRLRR..YASFCRTLATHAVTAGTA..SNRNIVPSPAAQ...SSATPAP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     143.03|      41|     240|     846|     897|       2
---------------------------------------------------------------------------
   90-  133 (76.81/30.74)	WC.GklnAIACASETCARIPSSTANPPF.....WIPIHIVIPERPTECAV
  851-  897 (66.22/46.06)	WVqG...AIAKISNPADGVSNPTPNPPItgppsFMPISVNTGTFPGTPAV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      60.44|      16|      30|       5|      20|       3
---------------------------------------------------------------------------
    5-   20 (28.80/17.61)	GGTKGPVVEVVEDEEP
   37-   52 (31.64/20.14)	GEQKQPPVENPMEEDP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     162.65|      37|     239|     414|     452|       5
---------------------------------------------------------------------------
  414-  450 (65.23/25.55)	WGSGVTAVAFDPTRGGSVIAVVIIEGQYMSPYDPDEG
 1177- 1213 (66.67/26.30)	WKTGLEGVWYKCIRCLRQTCAFTSPGSTNPPSQNDRE
 1216- 1235 (30.75/ 7.46)	WISRWTHGC..PICGGTWVRVV...............
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      41.57|      16|      29|     478|     493|       8
---------------------------------------------------------------------------
  461-  490 (22.47/13.31)	WES..slqhvvlhpifgnpTSSMGGQPPMQTV
  491-  522 (19.10/ 9.92)	WQSkvdlsipptndfknhrTHAVGMKTNVQKV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     285.21|      91|     420|     248|     347|       9
---------------------------------------------------------------------------
  248-  347 (158.75/98.61)	CVCSVFSSGSVQLH.....WSQWPHCQNAAPAR.WFCTSKGLLGC....GpSGIMDADAIITDSGA.....MHVAGV..PIVNPSTVVvwevmPGPgngFQATPKT..SINNCA....PPLSP
  659-  772 (126.46/61.77)	CTQSAAEDGIVSLNsiiavLDADFHSLPSAQHRqQYCPSLDRIKCrlleG.ANAQEVRAMVLDMQArllldMLGKGIesALIDPSVLV.....PDP...WQVSSDTlsRIDAQAvsvePALMP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     200.89|      63|     931|     134|     198|      10
---------------------------------------------------------------------------
  134-  198 (108.96/62.11)	FDVLADSPRDsVQFIEWSPTSCPRAL.LIAN...FHGRVTIWTQP...SQGPANLVRDTS.....YWQLEHEwRQDI
 1098- 1172 (91.93/44.66)	FGGLSSDPND.VGPANKLVSSSPRDLsSLENcdvYHGAHAIWPRKrrmSEREAAFGLNSSvglggYLGIMGS.RRDV
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP23410 with Med16 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) GGAHRTADANAQKPQPNASAPGNVDEVAKPVSTVVKSDDGQTNRTGQVVPGAKGTEEPTSGRSRVGTGNA
2) MNQVGGTKGPVVEVVEDEEPEAVAEAQEKNEAVELSGEQKQPPVENPMEEDPV
3) SNRNIVPSPAAQSSATPAPSQGAQNGTTSSSGTPQ
929
1
813
998
53
847










Molecular Recognition Features






MoRF SequenceStartStop




NANANA