<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23398
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MEHIYSSFNASFRDGSNHRFHEWLSDNRCLTSVSSSNLLAFTCVTDLKECEPKTQSINVYVIDLNIPHLPNLVTSHAEEVTSLEWDTIGSRLLIGDALGFVHIWSMKDYLINEWQLIYSHSCFLGERILASIWFHNGSKVCINPEKKDLILPYLEKFNYVKFGASVRQFGGKPVTGCMCISSSGIVSCLMLMPDGTFITGEETLGQFRAKVKVIDICYAKNGDFLVVTSNESTKSSINCYRVTVKLCTTYDKPKCNITCQQFSSFYLKCSTNDSYRLITHLKFVLKEAAEAVVVAATGLIGSTVELWELREKPVNLHKMFQTKEFGSSSLQPKTVVWQHHASITHSHTVVAIATPRQSLFDITPPLSYIVVAFRDNVIKCFYRENLQQVCSLNMSMTSIQDTSYNLQKMSNMANLTSIVDMQFTYSGCALIAMDATSQIFVYRVSPIIDPGSVYSPSFIQTLLEYCIITGNDWWDIIICLRPNIIDNVCDKLSEAFLQKQPIGFQQKWMSRFLTIKASLHRCSATNGPVKSGDCYALIWLNTISSVLKSLLRGKDHQDKDGPAEDLNALMHTRGNEIQHTNVDRVLQCIKHKEFFVEGPVLQSLQHLIQWTADFTLFLLASLPQQCHNHCLFPGGGLIFDTKSVNNLRELLVLIRIWGLINEPCLPLFTKLTSDNFDVIELLFKLLSKTVSAIGNEPDESLLDECCLLPNQVLIPQMDFTMKAIGVASPIIFINSHPLIFEYYSDAPFLKYQVKTHSIDGAVHISAGCKIDSIRHIGLGNVSDYNHNVRRCTRCTTVSLLHPFFKSAAARSWDQRWLKNCICGGNWRVQ |
Length | 829 |
Position | Tail |
Organism | Leptotrombidium deliense |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Arthropoda> Chelicerata> Arachnida> Acari>
Acariformes> Trombidiformes> Prostigmata> Anystina> Parasitengona>
Trombiculoidea> Trombiculidae> Leptotrombidium.
|
Aromaticity | 0.10 |
Grand average of hydropathy | 0.023 |
Instability index | 38.78 |
Isoelectric point | 7.11 |
Molecular weight | 93586.00 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP23398
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 68.81| 20| 28| 84| 104| 1
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84- 104 (33.66/23.52) EWDTIGSR.LLIGDALgFVHIW
113- 133 (35.16/19.69) EWQLIYSHsCFLGERI.LASIW
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 70.84| 21| 35| 528| 562| 2
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508- 528 (39.34/39.01) WMSRFLTIKASLHRC...SATNGP
539- 562 (31.50/20.17) WLNTISSVLKSLLRGkdhQDKDGP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 96.99| 30| 35| 428| 460| 3
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428- 460 (45.09/40.23) CALIAMDATSQIFVYRvSPIIDpgSV...YSPSFIQ
466- 498 (51.90/33.95) CIITGNDWWDIIICLR.PNIID..NVcdkLSEAFLQ
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 107.11| 28| 33| 211| 241| 4
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178- 208 (25.10/ 9.87) .....MC..ISSSGivsclmlmpDGTFITGEE....TLGQ.....FR
211- 241 (43.21/30.96) VKvidIC..YAKNG.........DFLVVTSNESTKSSINC.....YR
244- 276 (38.79/20.46) VK...LCttYDKPK...........CNITCQQFSSFYLKCstndsYR
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