<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23381

Description U-box domain-containing protein 35-like protein
SequenceMSQKERKDDGQGLTAVAIDKDKGSQHALKWAADRLVKKGETIILLHVNTKSNTIPNPMGSRVSMSDVHDNVASAYKSEMQAQSKEFFLPFRCFCTRKGVQCKNVVLDNPDVPKTIIEYVSQNGIENLVLGACSRSVFIRKFKGSDVPSTVLKGAPDFCTVYVISKGKISSVRSAARTAPATALRAELQTQINFKPERTQPTIHFAPTPKASETPRTSNVLQHDMDFVRSPFLRKGPNDKSFGDLSFLDTDILCVSSGRPSVDRMFPSLYDHMETAPRLSSASTGFDRSFELVPSNQSFPMSIERNEGWSPHGIDDIEAEMKRLKLELKQTMDMYNTACKEALTAKQKAQELHRWKIEEEQRLEESRLAGESAIAIVEKEKAKAKAAMEAAEAHKRIAELEAQKRINAEMRALKEVEDRKKAKDALVNTDIRYRKYTIEEIEIATENFSGSRKIGEGGYGPVYRCYLDHTPVAVKVLRPDAAQGRSQFQKEVEVLSCMRHPNMVLLLGACPENGCLVYEYMANGSLEDRLFQKGNTPVIPWQMRFRIAADIATGLLFLHQAKPEPLVHRDLKPANILLDRNYVSKIGDVGLARLVPQNVADCVTQYHITSAAGTFCYIDPEYQQTGMLGIKSDIYSLGIMLLQLITGRPPMGLAHHMERAIEKGTFEEMLDPTVQDWPVEEVLSFAKLAIKCAELRRKDRPDLAQVILPELQRLRDLGEDNMPLPIFGGSTNITPNHSHTSTNHSLSSNQDTVSDSSLKHSGYESHSSGT
Length769
PositionTail
OrganismCinnamomum micranthum f. kanehirae
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Magnoliidae> Laurales> Lauraceae> Cinnamomum.
Aromaticity0.06
Grand average of hydropathy-0.440
Instability index43.16
Isoelectric point7.58
Molecular weight85852.04
Publications
PubMed=30626928

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP23381
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      97.87|      31|      32|     319|     349|       1
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  319-  349 (52.67/36.92)	EMKRLKLELKQTMDMYNTACKE..ALTAKQKAQ
  350-  382 (45.20/30.66)	ELHRWKIEEEQRLEESRLAGESaiAIVEKEKAK
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      65.53|      20|      31|     187|     209|       2
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  187-  209 (27.83/28.94)	LQTQINFKpeRTqPTIHFAPTPK
  220-  239 (37.69/24.37)	LQHDMDFV..RS.PFLRKGPNDK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     132.08|      43|     374|     243|     299|       3
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  243-  299 (66.38/70.22)	DLSFLDTDILCVSS..............GRPSVdrmfpSLYDHMETAprlssastgFDR.SFE..LVPSNQSFP
  618-  677 (65.70/40.12)	DPEYQQTGMLGIKSdiyslgimllqlitGRPPM.....GLAHHMERA.........IEKgTFEemLDPTVQDWP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     258.38|      84|     374|      27|     132|       4
---------------------------------------------------------------------------
   27-  132 (127.39/122.00)	ALKWAADRlVKKGETIILLHVNTKSNTI.......PNPMGSRVSMSDVHDNVasayksemqaqskefflpFRCFCTRKGVQCKnvVLdNPDVP......KTIIEYVSQNGIENLV..LGAC
  411-  509 (130.99/80.76)	ALKEVEDR.KKAKDALVNTDIRYRKYTIeeieiatENFSGSRKIGEGGYGPV..................YRCYLDHTPVAVK..VL.RPDAAqgrsqfQKEVEVLSCMRHPNMVllLGAC
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP23381 with Med32 domain of Kingdom Viridiplantae
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