<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23318

Description U-box domain-containing protein 35-like protein
SequenceMWSQQGAGDDVQGAVAVAVEKDKGSQNALKWAVKNLVSRGQTLVLIHVVNKQPNAGISDMKEDSGLRQQQLELQYRDLFRPFRCFCIQKDIQCKDFVREHTDVAKALIEFVSNYAIENLVLGASTKGGFVRRFKSVDVPTTVCKGAPDFCSVYVISKGKVASARSAIRPAPARSPFRNQAHNQSSSLSNEQQPPPEMLMPSSNETPSRAHEDLSFRSPFVRGGRNPYKSYAEQLCPDTDISFVSSGRPSVDRTFPSMYDYLDSGRASNASDFDIRSFDSSRTPPRSSDVYSVGNDMSSFSQESSNTDDMEAEMKRLRLELKQTMDMYNTACKEALAAQQKARELHRWKLEEEQRIEEARMAEEAALAIAEKEKAKCRVAMEKAEVAQRIAELESQKRKNAEMKAQKESEEKMKALDALAQTDVRYRKYTIEEIEAATEFFAESRKIGEGGYGPVFRCHLDHTPVAVKVLRPDAAQGRSQFQKEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLDDRLFQRGNTPALPWQLRFRIAAEIGTGLLFLHQTKPEPLVHRDLKPANILLDRNFVSKISDVGLARLVPPNVADSVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDIYSLGIMLLQIITAKSPMGLTHHVERAIEKGTFAEMLDPAVTDWPVEEALVFANLALKCAEMRRKDRPDLGRVVLPELNRLRALAEEHMNHLIMGPNHTPLSRPPDIMSEHGYVSTKSRSSSTASGS
Length752
PositionTail
OrganismCinnamomum micranthum f. kanehirae
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Magnoliidae> Laurales> Lauraceae> Cinnamomum.
Aromaticity0.07
Grand average of hydropathy-0.471
Instability index51.21
Isoelectric point6.98
Molecular weight84135.72
Publications
PubMed=30626928

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP23318
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      85.15|      25|      28|     312|     339|       1
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  312-  336 (43.12/37.73)	EMKRLRLELKQTMDMYNTACKEALA
  343-  367 (42.03/26.90)	ELHRWKLEEEQRIEEARMAEEAALA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     122.25|      34|      40|     173|     212|       2
---------------------------------------------------------------------------
  173-  207 (59.02/40.63)	RSPFRNQAHNQSSSLSNEQQPPPEMLMPSSNEtPS
  216-  249 (63.22/29.65)	RSPFVRGGRNPYKSYAEQLCPDTDISFVSSGR.PS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      58.17|      16|      36|     101|     116|       3
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  101-  116 (26.97/20.45)	TDVAKALIEFVSNYAI
  140-  155 (31.20/24.93)	TTVCKGAPDFCSVYVI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      78.32|      27|      28|     381|     407|       5
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  381-  407 (42.42/31.22)	EKAEVAQRIAELESQKRKNA..EMKAQKE
  410-  438 (35.90/25.29)	EKMKALDALAQTDVRYRKYTieEIEAATE
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---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     218.12|      68|     166|     503|     579|       6
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  503-  579 (106.22/93.86)	PEYGCLVYeymANGSLDDRLFQRGNTP.....ALPWQLRFRIAAEIGTGLLFLhqtKPEplvHRDL.KPANILLDRNFVSKIS
  670-  743 (111.90/73.55)	PVEEALVF...ANLALKCAEMRRKDRPdlgrvVLPELNRLRALAEEHMNHLIM...GPN...HTPLsRPPDIMSEHGYVSTKS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      33.28|      10|      21|     273|     282|      10
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  273-  282 (18.91/11.11)	DIRSF..DSSRT
  295-  306 (14.36/ 6.79)	DMSSFsqESSNT
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP23318 with Med32 domain of Kingdom Viridiplantae
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