<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23316

Description Lysosomal beta glucosidase-like protein
SequenceMTLAEKIGQMTQIDRSVASFDVIRDLSIGSVLNGGDSAPSPDWTPSMWADMVDGYQRAALSSRLGIPMIYGTDAVHGHNNVFGSTVFPHNIGLGATRDADLVLRIGKATALEIRGTGIPYAFAPCLAYLLYGPLVAKALHSWVYEDGQRYSWCLHILIICALRGLIYQLWHSYGSMLFLTRNRMVNKQGVGYKQIDEEWDCSNANPPFWIPIHIVNPERPTECAIFNVIADSPRDSVQFMEWSPAPCPRALLIANFHGRITIWTQPSLGPVNLVRDASCWHCEHEWRQDLAVVTKWLAGMYPRHFVYTVMALLTCFVSMHLVCCVCQEQVGVGVGVRLTFCPPVLGFIVFGEMRVDLVEAALPLGVSMYWCLIGKRRELRPVPKTSDVRPVPKTFFVFPKTLISEISLPQNPNLHREEEEEAIDISFRPDRGLKLPAASRFQT
Length443
PositionTail
OrganismCinnamomum micranthum f. kanehirae
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Magnoliidae> Laurales> Lauraceae> Cinnamomum.
Aromaticity0.10
Grand average of hydropathy0.082
Instability index43.30
Isoelectric point6.67
Molecular weight49688.08
Publications
PubMed=30626928

Function

Annotated function 
GO - Cellular Component
extracellular region	GO:0005576	IEA:UniProtKB-KW

GO - Biological Function
hydrolase activity, hydrolyzing O-glycosyl compounds	GO:0004553	IEA:InterPro

GO - Biological Process
carbohydrate metabolic process	GO:0005975	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP23316
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      85.58|      25|      41|     126|     150|       1
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  126-  150 (45.73/37.27)	LAYLL...YGPLVAKALHSWVYEDGQRY
  165-  192 (39.85/31.48)	LIYQLwhsYGSMLFLTRNRMVNKQGVGY
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP23316 with Med16 domain of Kingdom Viridiplantae
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