<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23304

Description U-box domain-containing protein 33 isoform X2
SequenceMGLPIWSWEQLQISIKHYSKKMREPKSKKAIYVAREAQLSCHISFVCKGDLICTSGASLDGTRVWMTPPSPISSPSTSSGPSNRLNTRSVSLGQVGTPNRLKNSVLDFLIRSKSEGVATRMEVDTISNLLPETRALAMPVEGSVDHCRGMSMSNSPGSMSSTWSTIEGGVGSSPSISMERGIDCEDGSLLSLVSESEEHGYFTPPSDEQEGHIADQQVYEQLTQAMAEAEISRQAAVEELIKRHKAETDAINAILKAKASESLYADQMKQRKDVEELLARQTQELDKVKKQHEAALEELQRAREQQSVLEMQVANSHRSAKELQDKYLEAQELLKRLQREHDKLQQERDEAIREAEELQQWNEEVSMSLNRLSDLSKFSFSEIEKATNGFDLSLKIGEGGFGKVYKGILHHTPVAIKVLHPQSLQGQSEFQQEVDVLSRIRHPNVVTLIGTCTEARSLVYEYLPNGSLEDRLVCKDNTSPLSWQTRTCIITDVCSALIFLHSNKPQVVVHRDLKPANILLDANYVSKLGDFGICRLISQNSMTSYGCITDPKGTLLYMDPEFLSTGVLTEKSDVYSFGIIILRLLTGKSALGIVKEVQLALEAENLLGILDELAGDWPFVQAKQLAHLGLRCCEINGESRPDLETEVWKILEPMRTSTGYLSSYQLPSKDPCRAPPYFICPIFMEIMLDPHVAADGFTYEAEAFRGWLANGHETSPRTNDRLAHKELIPNRALKCAIQEWLHQQQ
Length745
PositionTail
OrganismCinnamomum micranthum f. kanehirae
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Magnoliidae> Laurales> Lauraceae> Cinnamomum.
Aromaticity0.06
Grand average of hydropathy-0.382
Instability index46.52
Isoelectric point5.53
Molecular weight83243.63
Publications
PubMed=30626928

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP23304
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      90.00|      21|      22|     275|     295|       1
---------------------------------------------------------------------------
  238-  258 (26.63/15.89)	EELIKRHKAETDAINAILKAK
  275-  295 (33.11/21.47)	EELLARQTQELDKVKKQHEAA
  331-  351 (30.27/19.03)	QELLKRLQREHDKLQQERDEA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     121.79|      24|     135|      47|      70|       2
---------------------------------------------------------------------------
   47-   70 (46.02/26.07)	CK.GDLICTSGASLDGTRVWMTPPS
  147-  168 (40.81/22.36)	CR.GMSMSNSPGSMSST..WSTIEG
  184-  206 (34.95/18.19)	CEdGSLL..SLVSESEEHGYFTPPS
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP23304 with Med32 domain of Kingdom Viridiplantae
Unable to open file!