<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23271

Description U-box domain-containing protein 35 isoform X1
SequenceMPSHGSNKPPTNLVMVAVDKDKNSGHAFRWITNNIDNPIIIAVHVKHKDIPHQGTNVFPPDEEDVANVFNPLREMCDDRVVKMKEAVIDDSDIARGILEYAKRNRIQTIIVGASSSFTSTLTKNVLSRSLNMRSISRKFKGYDDIPTTLIKSAPDYSSVFVVSKGKIVDTRSAISTSGNVVAQSHGFSSCKSENALRTQTFRSGSTNSRSGRSQLHEPLKFLSSSQSLEVIDISNRGQRSPFNGDSTSSSENDSSGSHKYASLDATKQDWDSSLASDSQSLGSMEAEMKTLKLKLKQTMEMYNSACKEAITAQNKAKEINQWKLEEARTVEEVMMSKEAALAMAEEEKEKAKAAFKAADEAMKMAEKETQRRLQLERKAMKEIEEKDRALNVLTRNDIRYRKYTLEDIEHATQNFSLSMKIGEGGYGPVFKGILDHTHVAIKILRPDASQGRKQFLQEVEVLCNIRHPNMVLLLGACQEYGCLVYEYMDNGSLEDRLLRKQNSPPIPWRKRFEIAYEIVTALLFLHQTKPEAIVHRDLKPANVLLDKNFVSKISDVGLARLVPPSVADSVTQYHMTSAAGTLCYIDPEYQQTGKLTTKSDVYSLGIMLLQIITAKPPMGLSHHVKRSIEIGNFSDMLDPLITDWPIEETLAFAKLALSCAELSKKDRPDLATLVIPELNRLRNVGTKSQKSYQNLSHVPRPPTPPRSPL
Length709
PositionTail
OrganismCicer arietinum (Chickpea) (Garbanzo)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> Hologalegina> IRL clade> Cicereae> Cicer.
Aromaticity0.06
Grand average of hydropathy-0.471
Instability index46.42
Isoelectric point8.69
Molecular weight79241.50
Publications
PubMed=26259924

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP23271
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     104.60|      36|      40|     312|     351|       2
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  312-  351 (50.27/50.64)	AQNKAKEiNQWKLEEARTVEEVMMSKEaalAMAE.EEKEKA
  353-  389 (54.33/40.32)	AAFKAAD.EAMKMAEKETQRRLQLERK...AMKEiEEKDRA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     145.42|      38|      40|     171|     208|       3
---------------------------------------------------------------------------
  103-  126 (25.51/11.58)	...........................................RNRIQ.T..IIVGASSSFTSTLTKNVL
  128-  196 (43.04/24.31)	RSLNMRSISRKFkgyddipttliksapdyssvfvvskgkivdtRSAIS.TSGNVVAQSHGFSSCKSENAL
  197-  237 (50.55/29.77)	RTQTFRSGSTNS............................rsgRSQLH.EPLKFLSSSQSLEVIDISNRG
  238-  262 (26.32/12.17)	QRSPFNGDST......................................sSSENDSSGSHKYAS.......
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     283.76|      86|     109|     478|     564|       4
---------------------------------------------------------------------------
  478-  564 (143.05/112.28)	QEYGCLVYEyMDNGSLEDRLLR.KQNSPPIPWRKRFEIAYEIVTALLFLHQTKPEAIVHRDLKPANVLLDKNFVSKISDVGLARLVPP
  590-  676 (140.71/104.79)	QQTGKLTTK.SDVYSLGIMLLQiITAKPPMGLSHHVKRSIEIGNFSDMLDPLITDWPIEETLAFAKLALSCAELSKKDRPDLATLVIP
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP23271 with Med32 domain of Kingdom Viridiplantae
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