<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23266

Description U-box domain-containing protein 52-like isoform X1
SequenceMWLQKNPWDKKDGVNGIVAVAIDTDKGSQNALKWAIDHLLTKGSTVVLIHVNVKTPSSIATPKAGMNSLIDQCSMLCKDPDDQTKEIFRPYRVFCARKDIQCKDIVLEHGDVSKALIEYTSQSAIEHLVIGSSSKSSFLKYSSASLFHPIRKFKVVDIPGTVSKGAPDFCTVYIVAKGKIHSMRSASRTAPAFSPLQTQLSQASSRSDQSDHRLPLANSVRANERRSFEGPRRSQEGTESFRSPFTRKRPDDKSYGDLSMQDTDITFISSGRPSTDRLFPSMYNNNNNSESSFSNPRLSYSSDTDGNLSYSFESMHYGRRSIDIGTPDFSSFSHDSDGLSSCASQNMDDVEAEMRRLKLELKQTMEMYSTACKEALTAQQKAVELQRWKIDEERRLEEARMAEENALAIAEKEKAKSKAAMEAAEAQKRIAELEAQKRINAEMKALREAEEKRKVVDALTNNDVRYRRYAIEEIEAATNFFAESLKIGEGGYGPVYKCLLDHTPVAVKVLRPDAAQGRSQFQREVEVLSCIRHPNMVLLLGACPEYGCLVYEHMANGSLDDCLFCRGDSPPLPWQLRFKIAAEIGTGLLFLHQTKPEPLVHRDLKPANILLDRNYVAKISDVGLARLVPPSVADNVTQYRMTSAAGTFCYIDPEYQQTGMLGVKSDIYSLGIIFLQILTARPPMGLTHHVGKSIEKGTFGEMLDPRLTDWPVEEALGFAEMAIKCAELRRKDRPDLGKEVMPELNRLRELAENNDNHSLFSGFISPSTQSQVSLQMDGSSSPLPYSGDSTRNTSSPL
Length797
PositionTail
OrganismCicer arietinum (Chickpea) (Garbanzo)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> Hologalegina> IRL clade> Cicereae> Cicer.
Aromaticity0.07
Grand average of hydropathy-0.474
Instability index47.90
Isoelectric point6.53
Molecular weight88854.69
Publications
PubMed=26259924

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP23266
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     129.98|      43|      47|     351|     396|       1
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  351-  393 (72.41/62.95)	EAEM.RRLKLELKQTMEMYSTACKEALTAQQKAVELQRWK.IDEE
  398-  442 (57.57/39.81)	EARMaEENALAIAEKEKAKSKAAMEAAEAQKRIAELEAQKrINAE
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     396.81|     126|     134|     517|     650|       2
---------------------------------------------------------------------------
  517-  650 (205.01/149.40)	GRSQFQRE..VEVLSCIRHPNMVLL..LGACPEYGclvYEHMANGSLDDCLFCRGDSPPL.PWQLRFKIA.AEIGTGLLFLHQtKPEPLVHRDLKPAnilLDR.NYVAKISDVG..LARLVPPSVADNVTqYRMTSAAGTFCY
  651-  785 (191.79/118.40)	IDPEYQQTgmLGVKSDIYSLGIIFLqiLTARPPMG...LTHHVGKSIEKGTFGEMLDPRLtDWPVEEALGfAEMAIKCAELRR.KDRPDLGKEVMPE...LNRlRELAENNDNHslFSGFISPSTQSQVS.LQMDGSSSPLPY
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     110.27|      25|      26|     206|     230|       3
---------------------------------------------------------------------------
  206-  228 (32.42/16.14)	...........RSDQ....S..DHRLPLANSVRANERRSF
  229-  255 (28.18/13.11)	EG.......prRSQE....GteSFRSPFTRK.RPDD.KSY
  256-  279 (20.88/ 7.90)	.G.............dlsmQ..DTDITFISSGRPSTDRLF
  280-  312 (28.79/13.54)	P.smynnnnnsESSF....S..NPRLSYSSDTDGNLSYSF
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      32.01|      14|      22|     110|     123|       5
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  115-  135 (17.08/ 8.36)	ALIEYTSQS.......aiehlviGSSSK
  137-  164 (14.93/ 6.37)	SFLKYSSASlfhpirkfkvvdipGTVSK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      46.03|      12|      15|      76|      87|       7
---------------------------------------------------------------------------
   76-   87 (22.56/13.80)	LCKDPDDQTKEI
   94-  105 (23.46/14.63)	FCARKDIQCKDI
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP23266 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) PAFSPLQTQLSQASSRSDQSDHRLPLANSVRANERRSFEGPRRSQEGTESFRSPFTRKRPDDKSYGDLSMQDTDITF
191
267










Molecular Recognition Features






MoRF SequenceStartStop




NANANA