<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23254

Description U-box domain-containing protein 34-like isoform X3
SequenceMIDNSITNIVLGAPRWNNAFIRKFKDVDVPTSLIKSLPESCMVHIISKGKVQNIQPTGCSQNITMTISSPQSNYLSKDLNRKSFKQRIWRRLSNDGGSFCQNNNARLVRCMSHRETYPSRISISDENQNVVDKSHIYDRSKSSKMFLNSMETEKTRLKQEKKRVTKKCRSASVGRESGSAKQMAMEVEKCKQEEWSREKARLVERAALNLAEAEKQKTSAELKTQKRKQEEVSGANEEAGGEERMRTLNESEKNKLLFKRYNIEEIEVAINYFDIDGKIGEGGYGPVFKGVLDQAAVAVKALRPDITQGEKQFHQEVLVLSSIRHPNIVILLGACPEYGCLVYEYLENGSLEDRLFQKDNTLPIPWKTRFKIASEIATGLLYLHKTKPEPVVHRDLKPANILLDGNYVSKITDVGLARLVPPSIANKTTQYHKTTAAGTFCYIDPEYQQTGLLGVKSDIYSLGVMLLQIITGKPPIGVAHLVEEAIQNGTLEEVLDPNVTDWPVEEALSFAKLALNCCEMRKKDRPDLATVILPELNRLRDLEL
Length544
PositionTail
OrganismCicer arietinum (Chickpea) (Garbanzo)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> Hologalegina> IRL clade> Cicereae> Cicer.
Aromaticity0.06
Grand average of hydropathy-0.486
Instability index47.59
Isoelectric point8.81
Molecular weight61371.69
Publications
PubMed=26259924

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP23254
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      59.36|      18|      20|     158|     176|       1
---------------------------------------------------------------------------
  158-  176 (26.02/20.64)	KQEKKRVtKKCRSASVGRE
  181-  198 (33.34/21.68)	KQMAMEV.EKCKQEEWSRE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     205.29|      64|     138|     310|     373|       2
---------------------------------------------------------------------------
  310-  373 (114.41/79.64)	EKQFHQEVL..VLSSIRHPNIVIL..LGACPEYGC..LVYEYLENGSLEDRLFQKDNTLPIPWKTRF.KIA
  444-  514 (90.88/61.81)	DPEYQQTGLlgVKSDIYSLGVMLLqiITGKPPIGVahLVEEAIQNGTLEEVLDPNVTDWPVEEALSFaKLA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      43.24|      15|      26|     212|     226|       5
---------------------------------------------------------------------------
  212-  226 (23.58/13.98)	EA...EKQKTSAELKTQK
  238-  255 (19.65/10.62)	EAggeERMRTLNESEKNK
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP23254 with Med32 domain of Kingdom Viridiplantae
Unable to open file!