<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23254

Description U-box domain-containing protein 34-like isoform X3
SequenceMIDNSITNIVLGAPRWNNAFIRKFKDVDVPTSLIKSLPESCMVHIISKGKVQNIQPTGCSQNITMTISSPQSNYLSKDLNRKSFKQRIWRRLSNDGGSFCQNNNARLVRCMSHRETYPSRISISDENQNVVDKSHIYDRSKSSKMFLNSMETEKTRLKQEKKRVTKKCRSASVGRESGSAKQMAMEVEKCKQEEWSREKARLVERAALNLAEAEKQKTSAELKTQKRKQEEVSGANEEAGGEERMRTLNESEKNKLLFKRYNIEEIEVAINYFDIDGKIGEGGYGPVFKGVLDQAAVAVKALRPDITQGEKQFHQEVLVLSSIRHPNIVILLGACPEYGCLVYEYLENGSLEDRLFQKDNTLPIPWKTRFKIASEIATGLLYLHKTKPEPVVHRDLKPANILLDGNYVSKITDVGLARLVPPSIANKTTQYHKTTAAGTFCYIDPEYQQTGLLGVKSDIYSLGVMLLQIITGKPPIGVAHLVEEAIQNGTLEEVLDPNVTDWPVEEALSFAKLALNCCEMRKKDRPDLATVILPELNRLRDLEL
Length544
PositionTail
OrganismCicer arietinum (Chickpea) (Garbanzo)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> Hologalegina> IRL clade> Cicereae> Cicer.
Aromaticity0.06
Grand average of hydropathy-0.486
Instability index47.59
Isoelectric point8.81
Molecular weight61371.69
Publications
PubMed=26259924

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP23254
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      59.36|      18|      20|     158|     176|       1
---------------------------------------------------------------------------
  158-  176 (26.02/20.64)	KQEKKRVtKKCRSASVGRE
  181-  198 (33.34/21.68)	KQMAMEV.EKCKQEEWSRE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     205.29|      64|     138|     310|     373|       2
---------------------------------------------------------------------------
  310-  373 (114.41/79.64)	EKQFHQEVL..VLSSIRHPNIVIL..LGACPEYGC..LVYEYLENGSLEDRLFQKDNTLPIPWKTRF.KIA
  444-  514 (90.88/61.81)	DPEYQQTGLlgVKSDIYSLGVMLLqiITGKPPIGVahLVEEAIQNGTLEEVLDPNVTDWPVEEALSFaKLA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      43.24|      15|      26|     212|     226|       5
---------------------------------------------------------------------------
  212-  226 (23.58/13.98)	EA...EKQKTSAELKTQK
  238-  255 (19.65/10.62)	EAggeERMRTLNESEKNK
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP23254 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) AEKQKTSAELKTQKRKQEEVSGANEEAGGEERMRT
2) KSSKMFLNSMETEKTRLKQEKKRVTKKCRSASVGRESGSAKQMAMEVEKC
213
141
247
190










Molecular Recognition Features






MoRF SequenceStartStop




1) FKQRIWRRL
84
92