<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23227
Description |
Uncharacterized protein |
Sequence | MSSTMNENLQETARRRKMEMTEVIHSPLQLICYLYEHCEHEADTSTFFCVGLVDTKFCFCCMIDLEPMDICTDSTSLPCEISSCDVRALEGHTSEVFVCAWSPEGSLLASGSGDSTARIWTIGDGSGNPTMQRMPPNVMVLKHLDSRATEENNDVTTLDWNRKGTLLATGSYDGQARIWTRSGSLFQTLNKHEGTIFSVKWNKKGDYLLSGSTDRTAVVWNVKSGELKQQFCFNAGFLDADWLDNNSFAIGSTDNKVYICKVGVNQPVKRFSGHKNAINAIKWDPSGSLLASCSEDTTVKIWSMKRDVCLHNFREHSKEINTVRWSPTGAGTSNPNKKLLLASASFDSTVKLWDIERGRLLHSLNGHREVVYSVAFSPNGDYLASGSLDKRMNICVRLPILDSD |
Length | 404 |
Position | Tail |
Organism | Solanum lycopersicum (Tomato) (Lycopersicon esculentum) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
asterids> lamiids> Solanales> Solanaceae> Solanoideae> Solaneae> Solanum>
Solanum subgen. Lycopersicon.
|
Aromaticity | 0.08 |
Grand average of hydropathy | -0.335 |
Instability index | 41.45 |
Isoelectric point | 6.02 |
Molecular weight | 45001.37 |
Publications | PubMed=22660326
|
Function
Annotated function |
|
GO - Cellular Component | histone deacetylase complex GO:0000118 IBA:GO_Central
|
GO - Biological Function | transcription corepressor activity GO:0003714 IBA:GO_Central
|
GO - Biological Process | histone deacetylation GO:0016575 IBA:GO_Central
regulation of transcription by RNA polymerase II GO:0006357 IBA:GO_Central
|
Interaction
Repeat regions
Repeats |
>MDP23227
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
7| 343.17| 38| 39| 160| 197| 1
---------------------------------------------------------------------------
87- 121 (45.63/24.54) ......RALEG...HTSEVF.................vcaWSPEGS.........LLASGSGDSTARIW.T
123- 180 (50.30/27.75) GDGSGNPTMQR...MPPNVMvlkhldsrateenndvttldWNRKGT.........LLATGSYDGQARIW.T
181- 222 (53.36/29.84) RSGSLFQTLNK...HEGTIF.................svkWNKKGD.........YLLSGSTDRTAVVWnV
223- 260 (45.63/24.54) KSGELKQQFCF...NAG.FL.................dadWLDNNS..........FAIGSTDNKVYI..C
261- 303 (50.79/28.08) KVG.VNQPVKRfsgHKNAIN.................aikWDPSGS.........LLASCSEDTTVKIW.S
305- 355 (43.41/23.02) KRDVCLHNFRE...HSKEIN.................tvrWSPTGAgtsnpnkklLLASASFDSTVKLWdI
356- 396 (54.05/30.32) ERGRLLHSLNG...HREVVY.................svaFSPNGD.........YLASGSLDKRMNIC.V
---------------------------------------------------------------------------
|