<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23226

Description Uncharacterized protein
SequenceMGSQNPGEDPIVVAVDKDKNSSSAVKWAIDNLLGNNQILVLIHVRVKNSPKPTLDSNGGLSDEATQNVFTPFKAYSARKRIVVKEIVIENTEASKGLLEYINSNSVTNIVLGASSRSALGRKYWTHDVPTLVNKAAPEFCSVYVVSKGKQQSVRPAAKSLPSCVPARQPSSSAWSAPRSSNSGSEDSIRFSYTRSDQKIVESEKMRPEKGPSIVPIDNPHFPEMTNPYKHTSQPDGMRYARISPRSVDMTSENLDFTQVAIRETPMNGNTSYSVDAEMKRLKLELRQTMDMYNAACKEAVVANQAADELNKWKIEEARKFEQARFAEEAALAIAETEKAKCRAAIEAAKKAQKMAEIEAQRRKYAELKAKREAEKKKQAINVRSQNDIRYRKYTIEEIEAATKKFSNAQKIGEGGYGPVFKGKLDHTPVAIKVLSPDAAQGKKQFQQEVEVLSLIRHPNLVLLLGACPEYGCLVYELMNNGSLEDRLFRKGNTPSIPWEIRFKIAAEIATGLLFLHQSKPEPLVHRDLKPGNILLDKNYVCKISDVGLARLVPSSVADCVTQYHMTSAAGTFCYIDPEYQQTGRLETKSDIYSLGVMLLQIITARPPMGLTHHVERAIEKGKFADFLDPTVPNWPVEEALKFAKLSLKCAELRKKDRPDLGSVVVPELTRLCEFGMSSMPGTG
Length683
PositionTail
OrganismSolanum lycopersicum (Tomato) (Lycopersicon esculentum)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> lamiids> Solanales> Solanaceae> Solanoideae> Solaneae> Solanum> Solanum subgen. Lycopersicon.
Aromaticity0.07
Grand average of hydropathy-0.444
Instability index41.26
Isoelectric point9.02
Molecular weight75848.97
Publications
PubMed=22660326

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP23226
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     148.39|      45|      50|     154|     203|       1
---------------------------------------------------------------------------
  154-  203 (66.95/49.74)	RPaaKSLPSCVPARQPSSSAWSAPRSSNSgSEDSIRfsYTRSDQKIVE..SE
  206-  252 (81.44/44.28)	RP..EKGPSIVPIDNPHFPEMTNPYKHTS.QPDGMR..YARISPRSVDmtSE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     148.99|      45|     168|     254|     298|       2
---------------------------------------------------------------------------
  254-  298 (77.36/51.86)	LDFTQVAIRE.TPMNGNTSYSVDAEMKRLKLELRQTMDMYNAACKE
  424-  469 (71.64/47.51)	LDHTPVAIKVlSPDAAQGKKQFQQEVEVLSLIRHPNLVLLLGACPE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      48.10|      16|      17|     314|     330|       3
---------------------------------------------------------------------------
  314-  330 (22.39/17.07)	IEEARKfEQARFAEEAA
  333-  348 (25.71/14.49)	IAETEK.AKCRAAIEAA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     192.18|      57|     109|     514|     571|       4
---------------------------------------------------------------------------
  514-  571 (92.71/59.00)	FLHQSKPEPLVHRDLKPGNILLDKNYVCKISDVGLARLVPSSVADcVTQYHMTSAAGT
  626-  682 (99.47/58.46)	FLDPTVPNWPVEEALKFAKLSLKCAELRKKDRPDLGSVVVPELTR.LCEFGMSSMPGT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      98.98|      28|     430|      54|      81|       5
---------------------------------------------------------------------------
   54-   81 (47.98/29.71)	LDSNGGLSDEATQNVFTPFKAYSARKRI
  477-  504 (51.01/32.00)	LMNNGSLEDRLFRKGNTPSIPWEIRFKI
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP23226 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) SEDSIRFSYTRSDQKIVESEKMRPEKGPSIVPIDNPHFPEMTNPYKHTSQPDGMRYARISPR
184
245










Molecular Recognition Features






MoRF SequenceStartStop




1) MRYARIS
237
243