Description | Uncharacterized protein |
Sequence | MDPDSKNFGRGPRELTGARDLISHFKLLPHYEFFGKRSLPLSISDTHYLHNVVGDTEIRKGEKMQLDQLTQDTSFSRETSSCIRPFDLDVLREAFQLRETAPVNLSPSDKGTPTIAGKSKSEMKDKEKKEKKHKKHKDKDKEKDKEHKKHKHRHKDRSKDKDKEKKKDKSGHNDPGAEHSKKHEKKRKHDEEDLNGVHKHKKSKHRSSKLDEIGSIKVAG |
Length | 220 |
Position | Head |
Organism | Solanum lycopersicum (Tomato) (Lycopersicon esculentum) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> lamiids> Solanales> Solanaceae> Solanoideae> Solaneae> Solanum> Solanum subgen. Lycopersicon. |
Aromaticity | 0.04 |
Grand average of hydropathy | -1.565 |
Instability index | 40.96 |
Isoelectric point | 9.66 |
Molecular weight | 25461.41 |
Publications | PubMed=22660326 |
Annotated function |
|
GO - Cellular Component | mediator complex GO:0016592 IBA:GO_Central |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro transcription factor binding GO:0008134 IBA:GO_Central |
GO - Biological Process | positive regulation of transcription by RNA polymerase II GO:0045944 IBA:GO_Central |
Binary Interactions |
Repeats | >MDP23182 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 57.28| 16| 16| 131| 146| 1 --------------------------------------------------------------------------- 131- 146 (30.98/11.70) KKHK.KHKDKDKEKDKE 148- 164 (26.30/ 8.81) KKHKhRHKDRSKDKDKE --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 52.74| 16| 18| 179| 195| 3 --------------------------------------------------------------------------- 179- 195 (24.44/15.05) HSKKHeKKRKHDEEDLN 196- 211 (28.30/13.42) GVHKH.KKSKHRSSKLD --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) KLDEIGSIKVA 2) MKDKEKKEKKHKKHKDKDKEKDKEHKKHKHRHKDRSKDKDKEKKKDKSGHNDPGAEHSKKHEKKRKHDEEDLNGVHKHKK | 209 123 | 219 202 |
© 2021 Shailesh Lab
Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab