<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23180

Description Uncharacterized protein
SequenceMWILCNYFDNFHVDSQSAGCCHGRSQGNAGEPIESTVASHSPTMAEMQQFFLPYRGICARKGIQAQEVILQDSDVAQALTEYISQKFITTIVFGASTRNALTRAFKIQDVPSSLSRSVPEFCSIYAISRGKVLKLKSASQPATPSSKASSSRTGFSHNSPISRVHIPQGSWGSIGTFESIDAGSRSIYSDSSSVSDRNPASQSTSPNYSSATEHTPKAWSDSQNSSRNPSPDRSVSTIGEVLNKSQLTRQPGCKNLTPISSWGNSDDFGEWAPPAELVGSSENSSQASVNSNTDTTKILHDRHLGSLLPPSQHRVNNLNLCMRPKENSFYSTSGSSDLSSSSSYRFSDMSFEHLDSSHNVSEASRSSISFQNADELEEEMKRLKFELKQSLDMHNGNCRRQAREIDHSASKEACNLEEAKEAPEASHAMLEKEKQKCKAALEVAQMAQYIAELESKKRWHEAEEKKKAQDAFACSENCYRRYSKDEIEAATNYFSNSQKIGEGGYGPVYKGYLDHTSVAIKVLRSDITQGQIQFQKEIEVLSRLRHPNVVLLLGTCPEYGCLVYECMEKGSLEDRLFCKDKSSPIPWPARFRIAAEIAAALHFFHLTKPEPIVHRDLKPANILLDANYRSKISDVGLARLVPPSVSGRFTQCLMTSAAGTFCYIDPEYQKTGMLNTKSDVYSLGIMLLQIITARPPMGLTHHVERSIEKGKFDDILDPSVNDWPLEEALSFAKLSLKCCELRRKDRPDLGSVILPELERLKNIALDYRRPSSSQENLAVTEEIRNSISDSQSDKAA
Length796
PositionTail
OrganismSolanum lycopersicum (Tomato) (Lycopersicon esculentum)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> lamiids> Solanales> Solanaceae> Solanoideae> Solaneae> Solanum> Solanum subgen. Lycopersicon.
Aromaticity0.07
Grand average of hydropathy-0.538
Instability index57.66
Isoelectric point6.45
Molecular weight88306.95
Publications
PubMed=22660326

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP23180
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     173.56|      38|      61|     138|     175|       1
---------------------------------------------------------------------------
  111-  134 (22.09/ 6.92)	......PSS.LSRSVPEFCSI......YAISRGKVLK.......
  138-  175 (68.24/36.55)	ASQPATPSSKASSSRTGFSHN......SPISRVHIPQGSWGSIG
  200-  223 (41.59/19.45)	ASQSTSPN.........YSSA......TE....HTPK.AWSDSQ
  225-  263 (41.64/19.47)	SSRN..PSPDRSVSTIGEVLNksqltrQPGCKNLTPISSWG...
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      72.16|      16|      75|     276|     291|       2
---------------------------------------------------------------------------
  276-  291 (27.78/16.85)	ELVGSSENSSQASVNS
  303-  316 (19.20/ 8.98)	HL.GSLLPPSQHRVN.
  352-  367 (25.17/14.46)	EHLDSSHNVSEASRSS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      65.61|      19|      19|     458|     476|       5
---------------------------------------------------------------------------
  458-  476 (33.62/23.81)	RWHEAEEKKKAQDAFACSE
  480-  498 (31.99/22.28)	RRYSKDEIEAATNYFSNSQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      56.20|      18|      18|     419|     436|       7
---------------------------------------------------------------------------
  419-  436 (28.67/18.21)	AKEAPEASHAMLEKEKQK
  440-  457 (27.54/17.23)	ALEVAQMAQYIAELESKK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     102.39|      31|     715|      20|      55|       8
---------------------------------------------------------------------------
   20-   55 (48.19/45.46)	CCHGRSQGNAGepIESTVAshsPTMAEMQQFFLPYR
  738-  768 (54.19/34.56)	CCELRRKDRPD..LGSVIL...PELERLKNIALDYR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      64.97|      18|     134|     567|     588|       9
---------------------------------------------------------------------------
  567-  588 (29.67/29.38)	MEKGSLEDRLfckdKSSPIPWP
  707-  724 (35.30/21.87)	IEKGKFDDIL....DPSVNDWP
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP23180 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) EWAPPAELVGSSENSSQASVNSNTDTTKILHDRHLGSLLPPSQHRVNNLNL
2) YSDSSSVSDRNPASQSTSPNYSSATEHTPKAWSDSQNSSRNPSPDRSVSTIGEVLNKSQLTRQ
270
188
320
250










Molecular Recognition Features






MoRF SequenceStartStop




1) ERLKNIALDYRR
758
769