<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23173

Description Uncharacterized protein
SequenceMSQRSFTGDQNKATVVAIDKDKGSQYALKWAVDTLIGRGKNVTLLHVKVRPSVSLPNADVSDGTPRVYRSDPDSQAKELFLPFRCFCTRKNIQVNEVVIEGIDIATSISDYVTANVIENLVVGAASRNGFVSRFKMTDVPTAVSKIVPDFCTVFVIAKGKIQSTKNASSPVPSSPTPSQQNHSTSSLGAKLGFADTRYAQISSDTKGLFFHLQHIALISVIKHLNTVRTGLTCPISPGSVTDIRSPYASRSSADDLDSIKSPFTRGKAINRSYGDLSVAESDLSFVSSGRPSSTFPISMDSSHDLGLPPRLSNSSDTDAKYSAPRLSNSSETESRLSFGSSFSATRLSEANGFSSNSFDSGNGSWSSPSNMEDIEAEMRRLKQELKQTMDMYSSACKEALSAKHKAMELHRWKVEEEQKLEEARLAEEAALAVAEKEKAKCRAALEAAEEAQRIAEREAQRRISAERKALKESEEKKKVLDALAQSDCRYRKYTIEEIETATDNFAAIRKIGEGGYGPVYKCYLDHTQVAIKVLRPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPEFGCLVYEYMANGSLDDRLFRRGSTQVLPWQLRFRIAAEVGTSLLFLHQTKPEPLVHRDLKPGNILLDRNYVSKISDVGLARLVPPSIADSVTQYRMTSTAGTFCYIDPEYQQTGMLGTKSDIYSFGIMLLQIITARPPMGLTHHVERAIEKGTFADMLDPAVPDWPVEEALTFAKLALKCAELRRKDRPDLGTVILPELNRLRLLAEEAMQPMHFGSSPRSPTSESRSSSQVSDIRTSL
Length808
PositionTail
OrganismSolanum lycopersicum (Tomato) (Lycopersicon esculentum)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> lamiids> Solanales> Solanaceae> Solanoideae> Solaneae> Solanum> Solanum subgen. Lycopersicon.
Aromaticity0.07
Grand average of hydropathy-0.359
Instability index50.58
Isoelectric point8.08
Molecular weight89085.97
Publications
PubMed=22660326

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP23173
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|      88.92|      19|      24|     442|     460|       1
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  397-  410 (18.45/ 9.80)	KEALSAKH..KAM.....E....LH
  411-  435 (16.39/ 7.91)	RWKVEEEQklEEARLAEEAalavAE
  442-  460 (29.06/19.56)	RAALEAAE..EAQRIAERE....AQ
  467-  485 (25.02/15.85)	RKALKESE..EKKKVLDAL....AQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      57.81|      19|      25|     234|     256|       2
---------------------------------------------------------------------------
  234-  254 (25.61/19.77)	PISPGSVTDiRSpYASRSSAD
  262-  280 (32.20/17.05)	PFTRGKAIN.RS.YGDLSVAE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      96.97|      29|     127|     156|     210|       3
---------------------------------------------------------------------------
  156-  186 (45.56/53.88)	IAKGKIQSTKNASSpvPSSPTPSQQNHSTSS
  774-  802 (51.41/16.39)	LAEEAMQPMHFGSS..PRSPTSESRSSSQVS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      82.53|      25|      49|     560|     586|       4
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  560-  586 (41.64/31.33)	MVLLLGACPEfgCLVYEYMANGS.LDDR
  612-  637 (40.89/23.84)	LLFLHQTKPE..PLVHRDLKPGNiLLDR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     128.92|      25|      42|     312|     336|       6
---------------------------------------------------------------------------
  281-  308 (34.09/15.64)	SDLSFVSSG.RPSSTFPISMDSSHdlgLP
  309-  333 (41.85/20.69)	PRLSNSSDT.DAKYSAPRLSNSSE...TE
  334-  352 (26.00/10.37)	SRLSFGS.....SFSATRLSEANG.....
  355-  377 (26.97/11.00)	...SNSFDSgNGSWSSPSNMEDIE...AE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     105.47|      35|     480|     193|     232|       8
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  193-  232 (50.63/59.68)	FADTRYAQISS.DTKGLFFHLqHIALISVIkhlnTVR..TGLT
  674-  711 (54.83/44.91)	YIDPEYQQTGMlGTKSDIYSF.GIMLLQII....TARppMGLT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      45.36|      15|      17|      98|     112|      10
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   98-  112 (25.13/15.95)	VIEGIDI.ATSISDYV
  116-  131 (20.23/11.56)	VIENLVVgAASRNGFV
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP23173 with Med32 domain of Kingdom Viridiplantae
Unable to open file!