Description | Uncharacterized protein |
Sequence | MNNQQPPVAKDTEVEKEEESSSVITNSLEPSTNKVHEKPDIIIEDDDDDHPAAIVAMVTEKEVSSVDDDPMDEDTVNPAVVFCIRLKQPRSNLLHKMSVPELCRNFSAVAWCGKLNAIACASETCARIPSSNANPPFWIPIHIVIPERPTECTVFNVIADSPRDSVQFIEWSPTSCPRALLIANFHGRITIWTQPSQGSANLVRDASCWQRDYEWHQDIAVVTKWLSGVSPYRWLSTRTGGSAKSTFEEKFLSQQPQSPGRFLVFALYFEYMFHQMSSYLTGVVNPSDETYCIDELSSSFGRRFTKSKHNKFLTYPRSVQLHWSQWPPNQNGAPSKWFCTSKGLLGAGPSGIMAADAIITDSGAMHVAGVPIVNPSTVVVWEVAPGPGNGFQATPKTSVSNGVPASLNPPSWDGYAPLAAYLLSSQEYLLQEAKQGKKLTEQHYSDMVTLHCSPVSNFSAYVSPEAAAQSTATTTWGSGVTAVAFDPTRGGSVIAVVIVEGQYMSPYDPDEGPSITGWRVQRWESSVEDVVLHQIFGNPTSSFGGQAPKQTVWVSKVIKCIPAGNDFKRPQAVGAGPVPFGKNMADSGVEMGKRVSFDPFDLPSDVRTLARIVYSAHGGEIAVAFLRGGVHVFSGPSFTPVDNYHIDVGSAIASPAFSSTSCCSASVWHDTTRDCTILKIIRVLPPAVPSNQVKANSANWERAIAERFWWSLLVGVDWWDAVGCTQSAAEDGIVALNSVIAVLDADFHSLPSTQHRQQYGPSLDRIKCRLLEGTNAQEVRAMVLDMQARLLLDMLGKGIESALTNPSALVPEPWQASSETLFGIDPEAMAVEPSLVPSIQAYVDAILDLASHFITRLRRYASFCRTLASHAVTAGTGGSRSMVTSPTQSASSPATSQGAQGGTASSAGSTQMQAWVQGAIAKISSTADSVPSSAPNPITGPSTFMPISINTGTFPGTPAVRLIGDCHFLHRLCQLLHFCFFFRGTQLPRFMGAAQRNADSSMQKPQSGIPGKTEDSNSGAKPTLGGQVGTGAKGSEEGPSKRSRIGSGNAGQGYTYEEVNFINY |
Length | 1064 |
Position | Tail |
Organism | Solanum lycopersicum (Tomato) (Lycopersicon esculentum) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> lamiids> Solanales> Solanaceae> Solanoideae> Solaneae> Solanum> Solanum subgen. Lycopersicon. |
Aromaticity | 0.08 |
Grand average of hydropathy | -0.191 |
Instability index | 48.37 |
Isoelectric point | 5.77 |
Molecular weight | 114787.88 |
Publications | PubMed=22660326 |
Annotated function |
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro |
GO - Biological Function | |
GO - Biological Process | regulation of transcription, DNA-templated GO:0006355 IBA:GO_Central |
Binary Interactions |
Repeats | >MDP23144 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 757.98| 209| 225| 128| 351| 1 --------------------------------------------------------------------------- 86- 236 (205.16/125.71) ............................................................................LKQPRSNLLHKMSVPElCRNFSAVAW..C...G.......KLNAIAC..A...setcarIPSSNANPPFWIPIHIV.IP.ERPTECTVFNViADSPRDSVQFIEWS..PTS..CPRALLIANFHGRI.TIWTQPSQGSANLVRDASCWQRDYEWH.QDIavVTKWLSGVSPYR.WLS 237- 463 (300.90/209.78) TRTGGSAKSTfeekfLSQQPQSPGRfLVFALYFEYMFhqMSSYLTGvVNPSDETYCIDELSSSFGRRFTkskHNKFLTYPRSVQLHWSQWPP.NQNGAPSKWF.CTSKG.......LLGAGPS..G..imaadaiITDSGA.......MHVAgVPiVNPSTVVVWEV.APGPGNGFQATPKT..SVSngVPASLNPPSWDGYA.PLAAYLLSSQEYLLQEAKQGKKLTEQHySDM..VTLHCSPVSNFSaYVS 473- 669 (251.91/148.87) TTTWGSGVTA.....VAFDPTRGGS.VIAVVIVEGQY..MSPYDPD.EGPSITGWRVQRWESSVEDVVL...HQIF.GNPTS...SFGGQAP.KQTVWVSKVIkCIPAGndfkrpqAVGAGPVpfGknmadsgveMGKRVSFDPFDLPSDV......RTLARIVYS..AHGGEIAVAFLRGGvhVFS..GPSFTPVDNYHIDVgSAIASPAFSSTSCC.SASVWH............................ --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 139.67| 42| 177| 721| 762| 2 --------------------------------------------------------------------------- 721- 762 (72.97/44.95) AVGCTQSAAEDGIVA..LNSVIAVLDADFHSLPSTQHRQQYGPS 899- 942 (66.71/40.43) AQGGTASSAGSTQMQawVQGAIAKISSTADSVPSSAPNPITGPS --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 166.97| 49| 112| 843| 893| 3 --------------------------------------------------------------------------- 843- 893 (79.37/53.32) VDAILDlaSHFITRLRRYASFCRTLASHAVTAGTGGSRSMVTSPTQSASS..P 960- 1010 (87.61/53.61) VRLIGD..CHFLHRLCQLLHFCFFFRGTQLPRFMGAAQRNADSSMQKPQSgiP --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) LEPSTNKVHEKPDIIIE 2) PTLGGQVGTGAKGSEEGPSKRSRIGSGNAGQGYTYEEVNFINY | 28 1022 | 44 1064 |
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Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab