<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23137

Description Uncharacterized protein
SequenceMEVSEEGNLWDSVLEITKVEQEKGGDPLVWAVQVSSCLSSSGVSLPSFELANFLVSHICWENNLPIAWKFLEKALVLKIVSPIIVFPLLSSRVIQNRRLRPAAFRLYMELMRRHIFTLKNHVNMLSYKKVVNFLDSILHLTEIFGVHADEPGVLVVEIIFSLVWQLLDASLDDEGLLQLTPEKKSRWPIKPEDVEIDGCIADMERNEQRERLKNLNTLLAIELIGQFLQNKVTAKILYLARQNMPVHWGAFVQRIQLLAGNSSALQSSSIISPKALLQLASDAHNLSKANSLQEHYVRSTSRSLATCAGLCFGSSRSSLWLPLDLFLEDAMDGSQVNATSAIEIITDLVKSLQAINATTWHETFLGLWMAALRLVQRERDPIEGPVPRLDTRLCMLFSIITLVIADLIEEEESEACDEIESSIGRHMKKQVEGTRREDVISCLQNLGDYQSLLTPPQAVTNAANQAAAKAMMFRSGANTSYFECINMKDMPTNCSGNLHHLIVEACIARNLLDTSAYFWPGYVNGRLNQLAHSMPTQVPGWSSFMKGAPLTPAIINALVSAPASSLAELEKIFEMAVKGEDDEKIAAATILCGASLIRGWNIQEHTVNFITRLLSPPVPTDYSGKDSHLIGYAPMLNVLLVGIAPVDCVQIFSLHGMVPQLAASSMTICEVFGSCAPNISWTLTTGEDISVHAVFSNAFALLLKLWRFNHPPIEYRVGDVPPVGCQLTPEYLLLVRNSHLVSSENMLKDPNRRRLATVARSSFPNPIFVDSFPKLRVWYRQHLACIASTLCGLVNGTLVCQTVDVLLSMMFKKINGGSQSLISITSGSSSSSGTGSEDTSMRPKLPAWDILEAVPFVVDAALTACAHGRLSPRELCTGLKDLADFLPASLATIVSYFSAEVTRGVWKPVFMNGTDWPSPAANLSNVEEQIKKILAATGVDVPSLVAGGSSPAILPLPLAAFVSLTITYKLDKASQRFLNLAGPALESLAAGCPWPCMPIVASLWTQKAKRWSDFLVFSASRTVFLNNHHAVIQLLKSCFNATLGLNSSSISSNGGIGALLGHGFGSHFYGGISPVAPGILYLRVYRSIRDIMFLREEIVSLLMQSISDIARSELPRQRLNKLKILKNGKKFGNVSLAATMTRVKLAALLGASLLWLSGGSGLVQSLIKETLPSWFLSVNSSNQEGDKGDLVPMLKGYALAYFAVLCGAFASGVDSLSMASKRRPKIIGRHVEFIASVLDGKISLGCDPSTWHAYVSGFVSLMVGCTPTWVYEVDAELLKRLSKGLRQWHEQDLALALLSIGGVGTMGSAAELIVEAST
Length1318
PositionTail
OrganismSolanum lycopersicum (Tomato) (Lycopersicon esculentum)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> lamiids> Solanales> Solanaceae> Solanoideae> Solaneae> Solanum> Solanum subgen. Lycopersicon.
Aromaticity0.07
Grand average of hydropathy0.187
Instability index47.79
Isoelectric point6.65
Molecular weight143985.24
Publications
PubMed=22660326

Function

Annotated function 
GO - Cellular Component
integral component of membrane	GO:0016021	IEA:UniProtKB-KW
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP23137
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      88.33|      24|      94|    1155|    1179|       1
---------------------------------------------------------------------------
 1155- 1179 (39.82/24.87)	WLSGGSGLVqSLIKETLPSWFLSVN
 1251- 1274 (48.51/26.57)	WHAYVSGFV.SLMVGCTPTWVYEVD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     236.06|      64|      93|     616|     681|       3
---------------------------------------------------------------------------
  616-  680 (100.91/64.87)	..............................PPVptDYSGK.DSHLIGYAPMLNVLLVGIAPVDCVQIFSLHGMV..P...QLA..ASSMTICEVF.GSCAPNIS
  681-  776 (72.22/39.97)	WtlttgedisvhavfsnafalllklwrfnhPPI..EYRVG.DVPPVGCQLTPEYLLL....VRNSHLVSSENMLkdPnrrRLAtvARSSFPNPIF.VDSFPKLR
  778-  828 (62.93/33.86)	W.......................................yRQHLACIASTLCGLVNGTLVCQTVDVL.LSMMF..K...KIN..GGSQSLISITsGS......
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     203.93|      60|     156|     910|     990|       5
---------------------------------------------------------------------------
   33-   82 (54.96/16.88)	...........QVSSCLSSSGVSLPSfelanfLVSH...ICWENNLP..........IAWKfLEKA..LVLKIVSP
  281-  326 (57.06/16.73)	SDAHNLSKANSLQEHYVRSTSRSLAT.......CAGlcfGSSRSSLWLPLDLF.......................
  918-  983 (91.90/67.11)	SPAANLSNVEEQIKKILAATGVDVPS......LVAG...GSSPAILPLPLAAFvsltITYK.LDKAsqRFLNLAGP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      52.91|      18|     156|    1032|    1052|       8
---------------------------------------------------------------------------
  255-  272 (30.90/18.53)	IQLLAG..NSS.ALQSSSIIS
 1032- 1052 (22.02/24.86)	IQLLKScfNATlGLNSSSISS
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP23137 with Med33 domain of Kingdom Viridiplantae
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