<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23069

Description U-box domain-containing protein 35
SequenceMSRLVQEKKIGAGRVVAVAIENNKTSQYAAKWAVDNLLPKDQALLLLHVRQRASSIPTPTGNLVPLDGNDDVARAYMQQMDNESKELFASFRVFCNRKSIQCKEVLLDDVDISKGLIEGISKYAIELLVLGAPSRSGLVRRFRTSDVPSLVSKGAPPFCTVYIISKGKIASVKTATAKPPPRNNTLQPQQSLQTPGRMDPHLTRNPALARPSMEKVPYIVHQQPADEDDIISPFTRPGRGGSYRSYESSIADSDISFVSSGRPSVDRMFPSMYDEMDSCINPRLSTGSDFDMRSYGSSFSGAKSIDRGDFSFSSQDSGTSMSSSIFSASDEVEAEMRRLKLELKQMEMYSTACKEAMTAKQKALELQRWKVEEQRKMEEARSTEEIALSMDEKEKAKCVAAMEAAETSRKIAELEARKRMTVESGHKKKTTDMFSHCSARYRKYTIEEIEEATNLFSNSLKVGEGGYGPVYRCELDHTPVAVKILKPDAAQGQAQFQQEIEVLSSIRHPNMVLLLGACPEFGCLVYEYMANGSLDDCLFRRGNKRALPWQLRFRIAAEIATGLLFLHQTKPEPLVHRDLKPGNILLDRNFVSKISDVGLARLVPASVEDSVTQYRMTSTAGTFCYIDPEYQQTGMLGTKSDIYSLGIMLLQIITAKPPMGLTHHVERAIEKGTFAEMLDPAVEDWPIEHALRFAQLALACAEMKRKDRPDLAKVVLPELNKLRDFAEDNMPMMMMFGAPTRSNYNYSNYPISSAQNSMSDGSTSGMSGYETQSSSHD
Length777
PositionTail
OrganismVigna radiata var. radiata (Mung bean) (Phaseolus aureus)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Vigna.
Aromaticity0.07
Grand average of hydropathy-0.412
Instability index49.38
Isoelectric point6.71
Molecular weight86513.76
Publications
PubMed=25384727

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP23069
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      53.17|      18|      21|     416|     435|       1
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  416-  435 (27.21/23.76)	AR.KRMTVEsgHKKKTTDMFS
  439-  457 (25.96/15.31)	ARyRKYTIE..EIEEATNLFS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      88.50|      22|      22|     366|     387|       2
---------------------------------------------------------------------------
  336-  363 (24.59/15.32)	M.RRLKLElKQMEMystacKEAMTAKQKA
  366-  387 (35.55/25.64)	L.QRWKVE.EQRKM.....EEARSTEEIA
  390-  412 (28.36/18.86)	MdEKEKAK.CVAAM.....EAAETSRKIA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      51.08|      20|      39|     248|     267|       3
---------------------------------------------------------------------------
  210-  238 (20.75/ 9.34)	RPSMEKvpyivhQQPADEDdiISpFTRPG
  239-  261 (30.33/17.05)	RGGSYR...syeSSIADSD..IS.FVSSG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      60.61|      19|      21|     115|     133|       4
---------------------------------------------------------------------------
  115-  133 (31.73/20.96)	GLIEGISKYAIELLV.LGAP
  137-  156 (28.88/18.44)	GLVRRFRTSDVPSLVsKGAP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      74.85|      23|      24|     284|     306|       8
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  284-  306 (40.23/19.78)	LSTGSDFDMRSYGSS.FSGAKSID
  310-  333 (34.62/16.18)	FSFSSQDSGTSMSSSiFSASDEVE
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP23069 with Med32 domain of Kingdom Viridiplantae
Unable to open file!