<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23067
Description |
mediator of RNA polymerase II transcription subunit 16 |
Sequence | MNQIPGTKDPEAEPVAQSLPQPQDTPKPPDKTDSAAVVVAATTTTEEQEVGQEEKRPVPMEEDSLNPATVFSIRLKQPRSNLLHKMSVPELCRNFSAVSWCGKLNAIACAAETCARIPSSTANPPFWIPIHIVIPERPTECAVFNVIADSPRDSVQFIEWSPTSCSRALLIANFHGRVTIWTQPSQGPANLVHDTSCWQREHEWRQDIAVVTKWLSGVSPYRWLSSKSSAPANAKSTFEEKFLSQQSQTSARWPNFLCVCSVFSSGSVQLHWSQWPPSKNDTTPKWFCTSKGLLGCGPSGIMAGDAIITDSGAMHVAGVPIVNPSTIVVWEVTPGPGNGFQVAPKTSTTCAVPPLSPPNWAGFAPLAAYLFSWQDYLLSEAKQGKKQTDQNLLDAVPLYCSPVSNFSAYVSPEAAAQSAATTTWGSGVTAVAFDPTRAGSVIAVVIVEGQYMSPYDPDEGPSITGWRVQRWESSLQHVVLHPIFGNPTSSMGGQSPMQTVWQSKVDLSITPTNDFKSHQSPATGMTSDVQKVSESGSDKSKRVNFDPFDLPSDVRTLARVVYSAHGGEIAIAFLRGGVHVFSGPNFTPVDNYQINVGSAIAAPAFSSTSCCSASVWHDSSKNCTILRIIRVLPPSIPISQVKANSSTWERAIAERFWWSLLVGVDWWDAVGCTQSAAEDGIVSLNSVIAVLDADFHSLPSIQHRQQYGPSLDRIKCRLLEGSNAQEVRAMVLDMQARLLLDMLGKGIESALINSSALVPEPWQASGETLSSIDPETMAVEPALIPSIQAYVDSVLDLASHFITRLRRYASFCRTLASHAVTAGTGSNRNMVASPTQSSATPATSQGGQNGTSSSMGSAQLQTWVQGAIAKISNTTEGGSNPTPNPISGPSTFMPISINTGTFPGTPAVRLIGDCHFLHRLCQLLLFCFFFRRTQLPRYMGSANRTSDANAQKPQSNTPAPGKVEEIAKPAVVKSDDGQSGRAGAKGAEEVPSGRSRLGSGNAGQGYTFEEVKVLFMMLMDLCRRTAGLQHPLPVSQVGSNNIQVRLHYIDGNYTVLPEVVEASLGPHMQNMPRPRGADAAGLLLRELELHPPAEEWHRRNMFGGPWSDQEDVDCANDAPKLVNSDPLDFSSMEHSDVYYGTHRLWPRKRRMSERDAAFGLNTSVGLGGYLGIMGSRRDVVTATWKTGLEGVWYKCVRCQRQTSAFSSPDAPPSLSPTDREVWWISRWVHGCPMCGGTWARVV |
Length | 1242 |
Position | Tail |
Organism | Vigna radiata var. radiata (Mung bean) (Phaseolus aureus) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade>
NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Vigna.
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Aromaticity | 0.08 |
Grand average of hydropathy | -0.238 |
Instability index | 48.55 |
Isoelectric point | 6.34 |
Molecular weight | 134660.52 |
Publications | PubMed=25384727
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Function
Annotated function |
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GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
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GO - Biological Function | |
GO - Biological Process | regulation of transcription, DNA-templated GO:0006355 IEA:InterPro
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Interaction
Repeat regions
Repeats |
>MDP23067
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 126.03| 37| 525| 581| 677| 1
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582- 626 (58.48/116.01) SGPN.FTPVdnyQINVGSAIAAPAFSSTSCCsasvwHDSSKNCTIL
887- 924 (67.56/17.51) SGPStFMPI...SINTGTFPGTPAVRLIGDC.....HFLHRLCQLL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 86.85| 23| 525| 650| 677| 2
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650- 673 (42.89/25.70) RAIAERFWWSLLVGVdWWDAVGCT
1177- 1199 (43.97/21.81) RDVVTATWKTGLEGV.WYKCVRCQ
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 39.79| 10| 15| 172| 181| 3
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172- 181 (19.70/11.71) ANFHGRVTIW
189- 198 (20.08/12.09) ANLVHDTSCW
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 178.10| 42| 526| 398| 473| 4
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334- 362 (46.14/ 8.72) ............PGPGNGFQVAPKTSTTCAVPPLS.PPNWAG
398- 439 (70.26/71.73) LYCSPVSNFSAYVSPEAAAQSAATTTWGSGVTAVAFDPTRAG
475- 512 (61.70/19.97) LQHVVLHPIFGNPTSSMGGQSPMQTVWQSKV.DLSITPT...
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 149.82| 45| 318| 721| 769| 7
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721- 769 (69.68/42.73) GSNAQEVRAMVLDMQARLLLDMlgkgIESALINSSALVPEPWQASGETL
1038- 1082 (80.14/41.13) GSNNIQVRLHYIDGNYTVLPEV....VEASLGPHMQNMPRPRGADAAGL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 58.59| 17| 28| 17| 34| 9
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17- 34 (28.18/19.30) QSLPQPQDTPKPPDKtDS
48- 64 (30.41/16.27) QEVGQEEKRPVPMEE.DS
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